RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 PRPHP41219 470 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 SEPT2Q15019 361 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 LLGL1Q15334 1064 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 CHMP6Q96FZ7 201 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 NUDCD1Q96RS6 583 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 KIF24Q5T7B8 1368 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 SERPINB4P48594 390 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 SPATA4Q8NEY3 305 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 CA8P35219 290 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 SH3BGRP55822 239 aaPredicted RBP16.92■□□□□ 0.3
SRPK1-204ENST00000373825 LRRC14Q15048 493 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 KRT31Q15323 416 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 BICDL1Q6ZP65 573 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 NOSTRINQ8IVI9 506 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 ARHGAP24Q8N264 748 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 MLXIPQ9HAP2 919 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 TLR7Q9NYK1 1049 aaKnown RBP16.92■□□□□ 0.3
SRPK1-204ENST00000373825 OLFML2BQ68BL8 750 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 DTHD1Q6ZMT9 781 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 RETREG2Q8NC44 543 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 BPIFA3Q9BQP9 254 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 PHF23Q9BUL5 403 aaPredicted RBP16.92■□□□□ 0.3
SRPK1-204ENST00000373825 TRAPPC8Q9Y2L5 1435 aa16.92■□□□□ 0.3
SRPK1-204ENST00000373825 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.91■□□□□ 0.3
SRPK1-204ENST00000373825 ADGRL2O95490 1459 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
SRPK1-204ENST00000373825 RCN2Q14257 317 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 CAPN12Q6ZSI9 719 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 MSANTD4Q8NCY6 345 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 ZCWPW1Q9H0M4 648 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 ATP6V0A4Q9HBG4 840 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 LGR5O75473 907 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 RAB17Q9H0T7 212 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 TBK1Q9UHD2 729 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 DNAJC8O75937 253 aaPredicted RBP16.91■□□□□ 0.3
SRPK1-204ENST00000373825 IKQ13123 557 aaPredicted RBP16.91■□□□□ 0.3
SRPK1-204ENST00000373825 CCDC92Q53HC0 331 aaPredicted RBP16.91■□□□□ 0.3
SRPK1-204ENST00000373825 PIK3AP1Q6ZUJ8 805 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
SRPK1-204ENST00000373825 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.3
SRPK1-204ENST00000373825 CSRNP2Q9H175 543 aa16.91■□□□□ 0.3
SRPK1-204ENST00000373825 TSPYL2Q9H2G4 693 aaPredicted RBP16.91■□□□□ 0.3
SRPK1-204ENST00000373825 ALDH1L1O75891 902 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 CHRM1P11229 460 aaPredicted RBP16.9■□□□□ 0.3
SRPK1-204ENST00000373825 IL13P35225 146 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 PLCB3Q01970 1234 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 LRRC8CQ8TDW0 803 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 ATP6V0A2Q9Y487 856 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 PTPRTO14522 1441 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 KDRP35968 1356 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 RAPGEF6Q8TEU7 1601 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 MAP3K7O43318 606 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 A1BGP04217 495 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 CHGBP05060 677 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 SCTRP47872 440 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 LINS1Q8NG48 757 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 TUBGCP2Q9BSJ2 902 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 CNOT10Q9H9A5 744 aaKnown RBP16.9■□□□□ 0.3
SRPK1-204ENST00000373825 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 MYBL2P10244 700 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 FXR1P51114 621 aaKnown RBP eCLIP16.9■□□□□ 0.3
SRPK1-204ENST00000373825 MAP3K12Q12852 859 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 TMEM266Q2M3C6 531 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 DCAF17Q5H9S7 520 aaPredicted RBP16.9■□□□□ 0.3
SRPK1-204ENST00000373825 KBTBD3Q8NAB2 608 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 PUS7Q96PZ0 661 aaKnown RBP16.9■□□□□ 0.3
SRPK1-204ENST00000373825 RMI1Q9H9A7 625 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 MTUS1Q9ULD2 1270 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 ADCY9O60503 1353 aa16.9■□□□□ 0.3
SRPK1-204ENST00000373825 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.3
SRPK1-204ENST00000373825 MAP7D3Q8IWC1 876 aa16.89■□□□□ 0.3
SRPK1-204ENST00000373825 RNF41Q9H4P4 317 aaPredicted RBP16.89■□□□□ 0.3
SRPK1-204ENST00000373825 VPS54Q9P1Q0 977 aa16.89■□□□□ 0.3
SRPK1-204ENST00000373825 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.3
SRPK1-204ENST00000373825 SFMBT2Q5VUG0 894 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 PROCA1Q8NCQ7 364 aaPredicted RBP16.89■□□□□ 0.29
SRPK1-204ENST00000373825 ZFATQ9P243 1243 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 CFAP73A6NFT4 308 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 RFX8Q6ZV50 586 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 COPS6Q7L5N1 327 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 CTTNBP2NLQ9P2B4 639 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 V9GY48 417 aaPredicted RBP16.89■□□□□ 0.29
SRPK1-204ENST00000373825 ABCB4P21439 1286 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 TRMT1LQ7Z2T5 733 aaKnown RBP16.89■□□□□ 0.29
SRPK1-204ENST00000373825 CROCCP2Q86T23 111 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 CENPKQ9BS16 269 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
SRPK1-204ENST00000373825 H7C1D1 291 aa16.88■□□□□ 0.29
SRPK1-204ENST00000373825 EIF4A3P38919 411 aaKnown RBP16.88■□□□□ 0.29
SRPK1-204ENST00000373825 ASIC2Q16515 512 aa16.88■□□□□ 0.29
SRPK1-204ENST00000373825 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
SRPK1-204ENST00000373825 RAB34Q9BZG1 259 aa16.88■□□□□ 0.29
SRPK1-204ENST00000373825 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
SRPK1-204ENST00000373825 TARSL2A2RTX5 802 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms