RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PPFIA4O75335 1185 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 ATP1A2P50993 1020 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 KRT31Q15323 416 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 CCDC6Q16204 474 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 KRT71Q3SY84 523 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 ABCB6Q9NP58 842 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 ZNF609O15014 1411 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 GCNT3O95395 438 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 CTNNA1P35221 906 aaKnown RBP19.25■□□□□ 0.67
PTPRU-202ENST00000373779 TRAPPC3LQ5T215 181 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 CC2D1AQ6P1N0 951 aaPredicted RBP19.25■□□□□ 0.67
PTPRU-202ENST00000373779 GPBP1Q86WP2 473 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 RASGRP4Q8TDF6 673 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 CARD10Q9BWT7 1032 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 MRPL44Q9H9J2 332 aaKnown RBP19.25■□□□□ 0.67
PTPRU-202ENST00000373779 DYNLL1P63167 89 aaKnown RBP19.25■□□□□ 0.67
PTPRU-202ENST00000373779 NKIRAS1Q9NYS0 192 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 KIF28PB7ZC32 967 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 POLR2FP61218 127 aaKnown RBP19.24■□□□□ 0.67
PTPRU-202ENST00000373779 RASGRF1Q13972 1273 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 CASP8Q14790 479 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 CLUL1Q15846 466 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 HOMER2Q9NSB8 354 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 CTTNBP2NLQ9P2B4 639 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 ZBTB21Q9ULJ3 1066 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 ZMYND10O75800 440 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 MYL1P05976 194 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 IL6STP40189 918 aaPredicted RBP19.24■□□□□ 0.67
PTPRU-202ENST00000373779 TTLL11Q8NHH1 800 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 SEC31BQ9NQW1 1179 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 MROH2AA6NES4 1674 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 CYP27B1O15528 508 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 SETDB1Q15047 1291 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 TCP11X2Q5H9J9 407 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 ANKRD13CQ8N6S4 541 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 AK8Q96MA6 479 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 IQCGQ9H095 443 aaKnown RBP19.24■□□□□ 0.67
PTPRU-202ENST00000373779 PPANQ9NQ55 473 aaKnown RBP19.24■□□□□ 0.67
PTPRU-202ENST00000373779 PANK4Q9NVE7 773 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 WDR17Q8IZU2 1322 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 THAP9Q9H5L6 903 aa19.24■□□□□ 0.67
PTPRU-202ENST00000373779 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.24■□□□□ 0.67
PTPRU-202ENST00000373779 SLC1A4P43007 532 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 PLCB3Q01970 1234 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 AEBP2Q6ZN18 517 aaPredicted RBP19.23■□□□□ 0.67
PTPRU-202ENST00000373779 HNRNPH2P55795 449 aaKnown RBP19.23■□□□□ 0.67
PTPRU-202ENST00000373779 RAB17Q9H0T7 212 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 PLCB1Q9NQ66 1216 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 APBA1Q02410 837 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 RSRC1Q96IZ7 334 aaKnown RBP19.23■□□□□ 0.67
PTPRU-202ENST00000373779 PTPRUQ92729 1446 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 KIDINS220Q9ULH0 1771 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 XRCC5P13010 732 aaKnown RBP19.23■□□□□ 0.67
PTPRU-202ENST00000373779 RASSF7Q02833 373 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 SPATS2Q86XZ4 545 aaKnown RBP19.23■□□□□ 0.67
PTPRU-202ENST00000373779 KIFAP3Q92845 792 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 IMPG2Q9BZV3 1241 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 SYNCQ9H7C4 482 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 AMFRQ9UKV5 643 aa19.23■□□□□ 0.67
PTPRU-202ENST00000373779 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTPRU-202ENST00000373779 SHC4Q6S5L8 630 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 MYCT1Q8N699 235 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 STAG1Q8WVM7 1258 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 DNAI2Q9GZS0 605 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 DIP2CQ9Y2E4 1556 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 CDC27P30260 824 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 AXIN2Q9Y2T1 843 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 CDC25AP30304 524 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 LACTBP83111 547 aaPredicted RBP19.22■□□□□ 0.67
PTPRU-202ENST00000373779 CCDC170Q8IYT3 715 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 U2AF1L4Q8WU68 220 aaKnown RBP19.22■□□□□ 0.67
PTPRU-202ENST00000373779 CAPN7Q9Y6W3 813 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 NPHP4O75161 1426 aaPredicted RBP19.22■□□□□ 0.67
PTPRU-202ENST00000373779 CCT5P48643 541 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 RABL6Q3YEC7 729 aaPredicted RBP19.22■□□□□ 0.67
PTPRU-202ENST00000373779 LY9Q9HBG7 655 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 KRIT1O00522 736 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 C2orf54Q08AI8 447 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 TAOK1Q7L7X3 1001 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 IFT74Q96LB3 600 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 PCDHA12Q9UN75 941 aa19.22■□□□□ 0.67
PTPRU-202ENST00000373779 FRMPD2Q68DX3 1309 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-202ENST00000373779 EPHB4P54760 987 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 GUCY2DQ02846 1103 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 FAM26FQ5R3K3 315 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 NHEJ1Q9H9Q4 299 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-202ENST00000373779 SLAIN2Q9P270 581 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 PRR29P0C7W0 189 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 LIG3P49916 1009 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 ZBED6P86452 979 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 FOXO4P98177 505 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 PPP1R14CQ8TAE6 165 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.21■□□□□ 0.67
PTPRU-202ENST00000373779 CCNL1Q9UK58 526 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-202ENST00000373779 CTIFO43310 598 aaKnown RBP19.21■□□□□ 0.67
PTPRU-202ENST00000373779 NEBLO76041 1014 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 KRT5P13647 590 aa19.21■□□□□ 0.67
PTPRU-202ENST00000373779 E4F1Q66K89 784 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-202ENST00000373779 PLCD3Q8N3E9 789 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms