RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 REXO1Q8N1G1 1221 aaKnown RBP30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 RASGRP4Q8TDF6 673 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 GLIS2Q9BZE0 524 aaPredicted RBP30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 KIAA1683Q9H0B3 1180 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 GLT8D2Q9H1C3 349 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 PICK1Q9NRD5 415 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 ZYXQ15942 572 aaKnown RBP30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 CCDC84Q86UT8 332 aaPredicted RBP30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 LPAR1Q92633 364 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 NUP62CLQ9H1M0 184 aa30.06■■■□□ 2.4
ATPAF1-202ENST00000371937 ZC3H15Q8WU90 426 aaKnown RBP30.05■■■□□ 2.4
ATPAF1-202ENST00000371937 AMNQ9BXJ7 453 aa30.05■■■□□ 2.4
ATPAF1-202ENST00000371937 RIC8AQ9NPQ8 531 aa30.05■■■□□ 2.4
ATPAF1-202ENST00000371937 PRR12Q9ULL5 1215 aa30.05■■■□□ 2.4
ATPAF1-202ENST00000371937 EPHX2P34913 555 aa30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 MRPL12P52815 198 aaKnown RBP30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 LRSAM1Q6UWE0 723 aa30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 FAM160B2Q86V87 743 aa30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 KLRG1Q96E93 195 aa30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 GOLPH3LQ9H4A5 285 aa30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 AS3MTQ9HBK9 375 aa30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 FEM1BQ9UK73 627 aa30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 PCDHA1Q9Y5I3 950 aa30.04■■■□□ 2.4
ATPAF1-202ENST00000371937 PTPREP23469 700 aa30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 TRAF1Q13077 416 aa30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 CUL5Q93034 780 aa30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 DOCK1Q14185 1865 aa30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 POLR2AP24928 1970 aaKnown RBP30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 FSD2A1L4K1 749 aa30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 NONOQ15233 471 aaKnown RBP eCLIP30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 ENGASEQ8NFI3 743 aa30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 WDR18Q9BV38 432 aa30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 SRPRBQ9Y5M8 271 aaKnown RBP30.03■■■□□ 2.4
ATPAF1-202ENST00000371937 USP14P54578 494 aa30.02■■■□□ 2.4
ATPAF1-202ENST00000371937 SNW1Q13573 536 aaKnown RBP30.02■■■□□ 2.4
ATPAF1-202ENST00000371937 ZNF174Q15697 407 aa30.02■■■□□ 2.4
ATPAF1-202ENST00000371937 FBXO11Q86XK2 927 aa30.02■■■□□ 2.4
ATPAF1-202ENST00000371937 ZKSCAN4Q969J2 545 aaPredicted RBP30.02■■■□□ 2.4
ATPAF1-202ENST00000371937 CLSTN2Q9H4D0 955 aa30.02■■■□□ 2.4
ATPAF1-202ENST00000371937 FBXO2Q9UK22 296 aaPredicted RBP30.02■■■□□ 2.4
ATPAF1-202ENST00000371937 SSC5DA1L4H1 1573 aa30.01■■■□□ 2.4
ATPAF1-202ENST00000371937 IQCA1LA6NCM1 817 aa30.01■■■□□ 2.4
ATPAF1-202ENST00000371937 KINO60870 393 aaKnown RBP30.01■■■□□ 2.4
ATPAF1-202ENST00000371937 ZNF579Q8NAF0 562 aaKnown RBP30.01■■■□□ 2.4
ATPAF1-202ENST00000371937 TNMDQ9H2S6 317 aa30.01■■■□□ 2.4
ATPAF1-202ENST00000371937 PSTPIP2Q9H939 334 aa30.01■■■□□ 2.4
ATPAF1-202ENST00000371937 A0A1B0GVL5 298 aa30.01■■■□□ 2.39
ATPAF1-202ENST00000371937 WDR46O15213 610 aaKnown RBP30.01■■■□□ 2.39
ATPAF1-202ENST00000371937 PTPRAP18433 802 aa30.01■■■□□ 2.39
ATPAF1-202ENST00000371937 INF2Q27J81 1249 aa30.01■■■□□ 2.39
ATPAF1-202ENST00000371937 KRT26Q7Z3Y9 468 aa30.01■■■□□ 2.39
ATPAF1-202ENST00000371937 BIN2Q9UBW5 565 aaPredicted RBP30.01■■■□□ 2.39
ATPAF1-202ENST00000371937 NOL9Q5SY16 702 aaKnown RBP30■■■□□ 2.39
ATPAF1-202ENST00000371937 FMR1NBQ8N0W7 255 aaPredicted RBP30■■■□□ 2.39
ATPAF1-202ENST00000371937 FERMT2Q96AC1 680 aa30■■■□□ 2.39
ATPAF1-202ENST00000371937 WNT7AO00755 349 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 NDUFA8P51970 172 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 RESP18Q5W5W9 173 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 GAS2L3Q86XJ1 694 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 CLIC6Q96NY7 704 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 MCM7P33993 719 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 DEKP35659 375 aaKnown RBP29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 ATP2C1P98194 919 aaPredicted RBP29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 PTGDRQ13258 359 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 MAP3K11Q16584 847 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 JAKMIP3Q5VZ66 844 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 SHC4Q6S5L8 630 aa29.99■■■□□ 2.39
ATPAF1-202ENST00000371937 FAM237AA0A1B0GTK4 181 aa29.98■■■□□ 2.39
ATPAF1-202ENST00000371937 ADM5C9JUS6 153 aa29.98■■■□□ 2.39
ATPAF1-202ENST00000371937 ZNF280CQ8ND82 737 aa29.98■■■□□ 2.39
ATPAF1-202ENST00000371937 KIFC2Q96AC6 838 aa29.98■■■□□ 2.39
ATPAF1-202ENST00000371937 SCN4AP35499 1836 aa29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 CTAGE5O15320 804 aa29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 PPP1R12BO60237 982 aaPredicted RBP29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 USP2O75604 605 aaPredicted RBP29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 PFKFB1P16118 471 aa29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 SPP2Q13103 211 aa29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 MTMR2Q13614 643 aa29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 CAMK4Q16566 473 aa29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 L1TD1Q5T7N2 865 aaKnown RBP29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 FZD1Q9UP38 647 aa29.97■■■□□ 2.39
ATPAF1-202ENST00000371937 CLK2P49760 499 aaKnown RBP29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 BACE1P56817 501 aa29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 SNAP25P60880 206 aa29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 NEK8Q86SG6 692 aa29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 RANBP17Q9H2T7 1088 aaKnown RBP29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 TAF1DQ9H5J8 278 aaPredicted RBP29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 ARL6IP4Q66PJ3 421 aaKnown RBP29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 MCTP2Q6DN12 878 aa29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 PNMA8AQ86V59 439 aaPredicted RBP29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 TMEM260Q9NX78 707 aa29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 FAM13BQ9NYF5 915 aa29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 HPSEQ9Y251 543 aa29.96■■■□□ 2.39
ATPAF1-202ENST00000371937 ORC2Q13416 577 aaPredicted RBP29.95■■■□□ 2.39
ATPAF1-202ENST00000371937 TEX2Q8IWB9 1127 aa29.95■■■□□ 2.39
ATPAF1-202ENST00000371937 TBCKQ8TEA7 893 aa29.95■■■□□ 2.39
ATPAF1-202ENST00000371937 ZHX2Q9Y6X8 837 aa29.95■■■□□ 2.39
ATPAF1-202ENST00000371937 NF2P35240 595 aa29.94■■■□□ 2.38
ATPAF1-202ENST00000371937 USH1GQ495M9 461 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms