RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 LAS1LQ9Y4W2 734 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-204ENST00000368292 EEA1Q15075 1411 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 CEP162Q5TB80 1403 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 SPATA31A3Q5VYP0 1347 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 FGRP09769 529 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 FAM87AP0C7U9 286 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 ATP2B1P20020 1258 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 CD97P48960 835 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 CPSF6Q16630 551 aaKnown RBP eCLIP6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 SNAP47Q5SQN1 464 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 FAM196AQ6ZSG2 479 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 TMTC2Q8N394 836 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 GIMAP7Q8NHV1 300 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 RASGRP4Q8TDF6 673 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 ZNF296Q8WUU4 475 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 DUSP23Q9BVJ7 150 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 PIM2Q9P1W9 311 aa6.61□□□□□ -1.35
ECHDC1-204ENST00000368292 ERBINQ96RT1 1412 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 SPATA31A5Q5VU36 1347 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 SPATA31A7Q8IWB4 1347 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 HYAL3O43820 417 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 TSPY4P0CV99 314 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 TSPY10P0CW01 314 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 CAP2P40123 477 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 ETF1P62495 437 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 HTRA3P83110 453 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 CDC37L1Q7L3B6 337 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 FAM214BQ7L5A3 538 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 KIAA0825Q8IV33 1275 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 KCT2Q8NC54 265 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 METTL22Q9BUU2 404 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 LEMD3Q9Y2U8 911 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 POLR3KQ9Y2Y1 108 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 CORINQ9Y5Q5 1042 aa6.6□□□□□ -1.35
ECHDC1-204ENST00000368292 PRR36Q9H6K5 1346 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 COBLO75128 1261 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 FOSL1P15407 271 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 YBX3P16989 372 aaKnown RBP eCLIP6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 SSTR4P31391 388 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 GTF2F1P35269 517 aaKnown RBP eCLIP6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 CRKP46108 304 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 CYP27A1Q02318 531 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 LRP8Q14114 963 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 MPP2Q14168 576 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 GLIPR1L2Q4G1C9 344 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 ARTNQ5T4W7 220 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 DUSP27Q5VZP5 1158 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 ARMCX6Q7L4S7 300 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 VPS37DQ86XT2 251 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 HID1Q8IV36 788 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 ARMC5Q96C12 935 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 TJP2Q9UDY2 1190 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 SUGT1Q9Y2Z0 365 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 SUPT16HQ9Y5B9 1047 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 U3KQE9 123 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 SBF2Q86WG5 1849 aa6.59□□□□□ -1.35
ECHDC1-204ENST00000368292 ROBO2Q9HCK4 1378 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 KIF15Q9NS87 1388 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 CDC42BPGQ6DT37 1551 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 KIAA1324LA8MWY0 1029 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 HMGB1P1B2RPK0 211 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 LRIG2O94898 1065 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 BPNT1O95861 308 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 RBL2Q08999 1139 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 ERICH6BQ5W0A0 696 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 FAM43BQ6ZT52 329 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 REC114Q7Z4M0 266 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 Q8N3U1 123 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 TOP6BLQ8N6T0 577 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 ACSF2Q96CM8 615 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 HEXIM2Q96MH2 286 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 LRRC3Q9BY71 257 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 FOXQ1Q9C009 403 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 COL14A1Q05707 1796 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 PEAK1Q9H792 1746 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 KIAA1210Q9ULL0 1709 aa6.58□□□□□ -1.36
ECHDC1-204ENST00000368292 COL24A1Q17RW2 1714 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 TLR3O15455 904 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 CYP26A1O43174 497 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 SLITRK5O94991 958 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 EOMESO95936 686 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 PGRP06401 933 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 SPINK2P20155 84 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 OS9Q13438 667 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 MSMPQ1L6U9 139 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 PRAMEF13Q5VWM6 474 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 INTS5Q6P9B9 1019 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 DPH6Q7L8W6 267 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 MRPL41Q8IXM3 137 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.57□□□□□ -1.367e-6■■■■□ 21.2
ECHDC1-204ENST00000368292 NT5C1AQ9BXI3 368 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 LNPKQ9C0E8 428 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 BTG4Q9NY30 223 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 UBP1Q9NZI7 540 aa6.57□□□□□ -1.36
ECHDC1-204ENST00000368292 ZC3H7BQ9UGR2 993 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms