RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KIFC2Q96AC6 838 aa17.89■□□□□ 0.45
CTSA-202ENST00000354880 M0R2N6 131 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 YEATS4O95619 227 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 NASPP49321 788 aaPredicted RBP17.88■□□□□ 0.45
CTSA-202ENST00000354880 SNAP25P60880 206 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 UBE2HP62256 183 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 MOB2Q70IA6 237 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 BICD2Q8TD16 824 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 C12orf42Q96LP6 360 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 AMNQ9BXJ7 453 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 NMRK2Q9NPI5 230 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 FBXO28Q9NVF7 368 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 PCDHA1Q9Y5I3 950 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 TOB1P50616 345 aaPredicted RBP17.88■□□□□ 0.45
CTSA-202ENST00000354880 HMGCS2P54868 508 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 KLHL40Q2TBA0 621 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 PIK3AP1Q6ZUJ8 805 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 FBXO11Q86XK2 927 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 LINC00301Q8NCQ3 95 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 RBM46Q8TBY0 533 aaKnown RBP17.88■□□□□ 0.45
CTSA-202ENST00000354880 ZNF526Q8TF50 670 aaPredicted RBP17.88■□□□□ 0.45
CTSA-202ENST00000354880 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
CTSA-202ENST00000354880 PCDHA6Q9UN73 950 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 PCDHA8Q9Y5H6 950 aa17.88■□□□□ 0.45
CTSA-202ENST00000354880 FAM205CA6NFA0 338 aa17.87■□□□□ 0.45
CTSA-202ENST00000354880 TRAF5O00463 557 aa17.87■□□□□ 0.45
CTSA-202ENST00000354880 MBD3O95983 291 aa17.87■□□□□ 0.45
CTSA-202ENST00000354880 ADCY7P51828 1080 aa17.87■□□□□ 0.45
CTSA-202ENST00000354880 SF3A1Q15459 793 aaKnown RBP17.87■□□□□ 0.45
CTSA-202ENST00000354880 NOM1Q5C9Z4 860 aaKnown RBP17.87■□□□□ 0.45
CTSA-202ENST00000354880 PRPF38AQ8NAV1 312 aaKnown RBP17.87■□□□□ 0.45
CTSA-202ENST00000354880 RASGRP4Q8TDF6 673 aa17.87■□□□□ 0.45
CTSA-202ENST00000354880 SLF1Q9BQI6 1058 aa17.87■□□□□ 0.45
CTSA-202ENST00000354880 TANGO6Q9C0B7 1094 aa17.87■□□□□ 0.45
CTSA-202ENST00000354880 RANBP17Q9H2T7 1088 aaKnown RBP17.87■□□□□ 0.45
CTSA-202ENST00000354880 RPAP3Q9H6T3 665 aaPredicted RBP17.87■□□□□ 0.45
CTSA-202ENST00000354880 ELP3Q9H9T3 547 aa17.87■□□□□ 0.45
CTSA-202ENST00000354880 NOL7Q9UMY1 257 aaKnown RBP17.87■□□□□ 0.45
CTSA-202ENST00000354880 PPATQ06203 517 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 TRAF1Q13077 416 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 STK38Q15208 465 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
CTSA-202ENST00000354880 ERO1BQ86YB8 467 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 REXO1Q8N1G1 1221 aaKnown RBP17.86■□□□□ 0.45
CTSA-202ENST00000354880 GPT2Q8TD30 523 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 KCNG4Q8TDN1 519 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 CLMNQ96JQ2 1002 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 RIC8AQ9NPQ8 531 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 TMOD4Q9NZQ9 345 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 CCDC194A0A1B0GVG4 234 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 SH3D19Q5HYK7 790 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 CUL5Q93034 780 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 ANP32EQ9BTT0 268 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 GLT8D2Q9H1C3 349 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 ZNF408Q9H9D4 720 aa17.86■□□□□ 0.45
CTSA-202ENST00000354880 GOLGA6L4A6NEF3 574 aa17.85■□□□□ 0.45
CTSA-202ENST00000354880 SPTLC2O15270 562 aa17.85■□□□□ 0.45
CTSA-202ENST00000354880 FLOT1O75955 427 aa17.85■□□□□ 0.45
CTSA-202ENST00000354880 ATP2B1P20020 1258 aa17.85■□□□□ 0.45
CTSA-202ENST00000354880 TRAPPC10P48553 1259 aa17.85■□□□□ 0.45
CTSA-202ENST00000354880 MRPL12P52815 198 aaKnown RBP17.85■□□□□ 0.45
CTSA-202ENST00000354880 FMR1Q06787 632 aaKnown RBP eCLIP17.85■□□□□ 0.45
CTSA-202ENST00000354880 SLC39A14Q15043 492 aa17.85■□□□□ 0.45
CTSA-202ENST00000354880 USH1GQ495M9 461 aa17.85■□□□□ 0.45
CTSA-202ENST00000354880 PSTPIP2Q9H939 334 aa17.85■□□□□ 0.45
CTSA-202ENST00000354880 SPDYE5A6NIY4 337 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 ME1P48163 572 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 PTPAQ15257 358 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 TPRNQ4KMQ1 711 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 LDLRAD1Q5T700 205 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 CCDC174Q6PII3 467 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 KRT25Q7Z3Z0 450 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 PGBD1Q96JS3 809 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 PPP1R9AQ9ULJ8 1098 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 PCDHB6Q9Y5E3 794 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 PTPRFP10586 1907 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 OTUD5Q96G74 571 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 BIN2Q9UBW5 565 aaPredicted RBP17.84■□□□□ 0.45
CTSA-202ENST00000354880 CEP131Q9UPN4 1083 aa17.84■□□□□ 0.45
CTSA-202ENST00000354880 UNCXA6NJT0 531 aa17.83■□□□□ 0.44
CTSA-202ENST00000354880 IRF6O14896 467 aa17.83■□□□□ 0.44
CTSA-202ENST00000354880 NONOQ15233 471 aaKnown RBP eCLIP17.83■□□□□ 0.44
CTSA-202ENST00000354880 JAKMIP3Q5VZ66 844 aa17.83■□□□□ 0.44
CTSA-202ENST00000354880 SMCHD1A6NHR9 2005 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 PPP6R2O75170 966 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 FDX1P10109 184 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 CLK2P49760 499 aaKnown RBP17.82■□□□□ 0.44
CTSA-202ENST00000354880 FKBP1BP68106 108 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 PPIL2Q13356 520 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 TTC38Q5R3I4 469 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 JMYQ8N9B5 988 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 SLC38A10Q9HBR0 1119 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.82■□□□□ 0.44
CTSA-202ENST00000354880 PCDHA7Q9UN72 937 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 PARP14Q460N5 1801 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 CXCL11O14625 94 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 MARCKSP29966 332 aaPredicted RBP17.82■□□□□ 0.44
CTSA-202ENST00000354880 UBE2SQ16763 222 aa17.82■□□□□ 0.44
CTSA-202ENST00000354880 INF2Q27J81 1249 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms