RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 SLC16A2P36021 539 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 MUM1L1Q5H9M0 696 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 MFSD6Q6ZSS7 791 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 FAM133AQ8N9E0 248 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 CHST13Q8NET6 341 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 DSCC1Q9BVC3 393 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 KATNBL1Q9H079 304 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 TOMM22Q9NS69 142 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 DIAPH3Q9NSV4 1193 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 NRBP1Q9UHY1 535 aa20.13■□□□□ 0.81
BRCC3-202ENST00000340647 A0A1W2PPC1 479 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 SNHG28P0DPA3 235 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 FDX1P10109 184 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 PDHBP11177 359 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 PCP11498 1178 aaKnown RBP20.12■□□□□ 0.81
BRCC3-202ENST00000340647 CNTN2Q02246 1040 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 LRRC41Q15345 812 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 PPP4R3BQ5MIZ7 849 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 ZNF467Q7Z7K2 595 aaPredicted RBP20.12■□□□□ 0.81
BRCC3-202ENST00000340647 DCAF4Q8WV16 495 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 LRCH3Q96II8 777 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 ZKSCAN3Q9BRR0 538 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 RANBP17Q9H2T7 1088 aaKnown RBP20.12■□□□□ 0.81
BRCC3-202ENST00000340647 A1CFQ9NQ94 594 aaKnown RBP20.12■□□□□ 0.81
BRCC3-202ENST00000340647 HOMER2Q9NSB8 354 aa20.12■□□□□ 0.81
BRCC3-202ENST00000340647 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
BRCC3-202ENST00000340647 FRMPD2Q68DX3 1309 aaPredicted RBP20.11■□□□□ 0.81
BRCC3-202ENST00000340647 SYNGAP1Q96PV0 1343 aa20.11■□□□□ 0.81
BRCC3-202ENST00000340647 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
BRCC3-202ENST00000340647 ZNF213O14771 459 aa20.11■□□□□ 0.81
BRCC3-202ENST00000340647 MFAP1P55081 439 aaKnown RBP20.11■□□□□ 0.81
BRCC3-202ENST00000340647 IRX5P78411 483 aaPredicted RBP20.11■□□□□ 0.81
BRCC3-202ENST00000340647 MSL3Q8N5Y2 521 aaKnown RBP20.11■□□□□ 0.81
BRCC3-202ENST00000340647 DDX11Q96FC9 970 aa20.11■□□□□ 0.81
BRCC3-202ENST00000340647 RNF146Q9NTX7 359 aa20.11■□□□□ 0.81
BRCC3-202ENST00000340647 LAMA2P24043 3122 aaKnown RBP20.1■□□□□ 0.81
BRCC3-202ENST00000340647 MYH6P13533 1939 aa20.1■□□□□ 0.81
BRCC3-202ENST00000340647 HIP1O00291 1037 aa20.1■□□□□ 0.81
BRCC3-202ENST00000340647 ADAMTS4O75173 837 aa20.1■□□□□ 0.81
BRCC3-202ENST00000340647 ATN1P54259 1190 aaPredicted RBP20.1■□□□□ 0.81
BRCC3-202ENST00000340647 CCDC174Q6PII3 467 aa20.1■□□□□ 0.81
BRCC3-202ENST00000340647 ANKS1AQ92625 1134 aa20.1■□□□□ 0.81
BRCC3-202ENST00000340647 TTC14Q96N46 770 aa20.1■□□□□ 0.81
BRCC3-202ENST00000340647 PURBQ96QR8 312 aaKnown RBP20.1■□□□□ 0.81
BRCC3-202ENST00000340647 B4E1Z4 1266 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 KDM4AO75164 1064 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 PGK1P00558 417 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 CHMLP26374 656 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 BMP8BP34820 402 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 MAGEA10P43363 369 aaPredicted RBP20.09■□□□□ 0.81
BRCC3-202ENST00000340647 PTH1RQ03431 593 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 ZNF543Q08ER8 600 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 SNX17Q15036 470 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 CCDC96Q2M329 555 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 ANKRD35Q8N283 1001 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 ARRDC4Q8NCT1 418 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 TRERF1Q96PN7 1200 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 ACAD9Q9H845 621 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 GPCPD1Q9NPB8 672 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 ZSWIM5Q9P217 1185 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 FBXO40Q9UH90 709 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 ISY1Q9ULR0 285 aaKnown RBP20.09■□□□□ 0.81
BRCC3-202ENST00000340647 TAF6LQ9Y6J9 622 aa20.09■□□□□ 0.81
BRCC3-202ENST00000340647 ALAS1P13196 640 aa20.08■□□□□ 0.81
BRCC3-202ENST00000340647 ADCYAP1R1P41586 468 aa20.08■□□□□ 0.81
BRCC3-202ENST00000340647 IKQ13123 557 aaPredicted RBP20.08■□□□□ 0.81
BRCC3-202ENST00000340647 SYDE2Q5VT97 1194 aa20.08■□□□□ 0.81
BRCC3-202ENST00000340647 CCSAPQ6IQ19 270 aaPredicted RBP20.08■□□□□ 0.81
BRCC3-202ENST00000340647 SLC39A5Q6ZMH5 540 aa20.08■□□□□ 0.81
BRCC3-202ENST00000340647 CPVLQ9H3G5 476 aa20.08■□□□□ 0.81
BRCC3-202ENST00000340647 RNF41Q9H4P4 317 aaPredicted RBP20.08■□□□□ 0.81
BRCC3-202ENST00000340647 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.08■□□□□ 0.81
BRCC3-202ENST00000340647 CTDP1Q9Y5B0 961 aaPredicted RBP20.08■□□□□ 0.81
BRCC3-202ENST00000340647 MYADML2A6NDP7 307 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 ICAM1P05362 532 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 ACVR2BQ13705 512 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 TKFCQ3LXA3 575 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 ARMCX2Q7L311 632 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 SKAP1Q86WV1 359 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 DGKHQ86XP1 1220 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 CCDC144CPQ8IYA2 1237 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 KLHDC9Q8NEP7 349 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 ESR2Q92731 530 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 XPNPEP3Q9NQH7 507 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 PHF24Q9UPV7 400 aa20.07■□□□□ 0.8
BRCC3-202ENST00000340647 CTAGE5O15320 804 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 RARBP10826 455 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 AKR1A1P14550 325 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 PTGS1P23219 599 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 RTP1P59025 263 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 ENAHQ8N8S7 591 aaPredicted RBP20.06■□□□□ 0.8
BRCC3-202ENST00000340647 SLC17A8Q8NDX2 589 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 CLEC4DQ8WXI8 215 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 FERMT2Q96AC1 680 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 CYP39A1Q9NYL5 469 aa20.06■□□□□ 0.8
BRCC3-202ENST00000340647 SYNRGQ9UMZ2 1314 aa20.05■□□□□ 0.8
BRCC3-202ENST00000340647 NFIBO00712 420 aa20.05■□□□□ 0.8
BRCC3-202ENST00000340647 GOLGA8HP0CJ92 632 aa20.05■□□□□ 0.8
BRCC3-202ENST00000340647 TMEM63BQ5T3F8 832 aa20.05■□□□□ 0.8
BRCC3-202ENST00000340647 CYB5R4Q7L1T6 521 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms