RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DPF3Q92784 378 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 AGBL1Q96MI9 1066 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 KAT14Q9H8E8 782 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 HOMER2Q9NSB8 354 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 CYP21A2P08686 494 aa32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 SLC16A2P36021 539 aa32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 ZNF543Q08ER8 600 aa32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 SKAP1Q86WV1 359 aa32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 ENAHQ8N8S7 591 aaPredicted RBP32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 MAP4K1Q92918 833 aa32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 TINF2Q9BSI4 451 aa32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 ACAD9Q9H845 621 aa32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 NRBP1Q9UHY1 535 aa32.41■■■□□ 2.78
ATPAF1-201ENST00000329231 DNAJC25-GNG10A0A024R161 153 aa32.4■■■□□ 2.78
ATPAF1-201ENST00000329231 SNAP25P60880 206 aa32.4■■■□□ 2.78
ATPAF1-201ENST00000329231 PNMA1Q8ND90 353 aa32.4■■■□□ 2.78
ATPAF1-201ENST00000329231 DIS3LQ8TF46 1054 aaKnown RBP32.4■■■□□ 2.78
ATPAF1-201ENST00000329231 RNF146Q9NTX7 359 aa32.4■■■□□ 2.78
ATPAF1-201ENST00000329231 TNKSO95271 1327 aa32.4■■■□□ 2.78
ATPAF1-201ENST00000329231 GPATCH4Q5T3I0 446 aaKnown RBP32.39■■■□□ 2.78
ATPAF1-201ENST00000329231 MSL3Q8N5Y2 521 aaKnown RBP32.39■■■□□ 2.78
ATPAF1-201ENST00000329231 RANBP17Q9H2T7 1088 aaKnown RBP32.39■■■□□ 2.78
ATPAF1-201ENST00000329231 SEPT4O43236 478 aa32.38■■■□□ 2.77
ATPAF1-201ENST00000329231 ALAS1P13196 640 aa32.38■■■□□ 2.77
ATPAF1-201ENST00000329231 MNX1P50219 401 aaPredicted RBP32.38■■■□□ 2.77
ATPAF1-201ENST00000329231 ERICH6BQ5W0A0 696 aa32.38■■■□□ 2.77
ATPAF1-201ENST00000329231 TRERF1Q96PN7 1200 aa32.38■■■□□ 2.77
ATPAF1-201ENST00000329231 ESYT1Q9BSJ8 1104 aa32.38■■■□□ 2.77
ATPAF1-201ENST00000329231 CCPG1Q9ULG6 757 aa32.38■■■□□ 2.77
ATPAF1-201ENST00000329231 ICAM1P05362 532 aa32.37■■■□□ 2.77
ATPAF1-201ENST00000329231 PRAMEF19Q5SWL8 479 aa32.37■■■□□ 2.77
ATPAF1-201ENST00000329231 RBM8AQ9Y5S9 174 aaKnown RBP32.37■■■□□ 2.77
ATPAF1-201ENST00000329231 ZNF467Q7Z7K2 595 aaPredicted RBP32.36■■■□□ 2.77
ATPAF1-201ENST00000329231 RALYLQ86SE5 291 aaKnown RBP32.36■■■□□ 2.77
ATPAF1-201ENST00000329231 C11orf49Q9H6J7 331 aa32.36■■■□□ 2.77
ATPAF1-201ENST00000329231 PNMA2Q9UL42 364 aa32.36■■■□□ 2.77
ATPAF1-201ENST00000329231 IFIT1BQ5T764 474 aaKnown RBP32.35■■■□□ 2.77
ATPAF1-201ENST00000329231 NCOA7Q8NI08 942 aa32.35■■■□□ 2.77
ATPAF1-201ENST00000329231 CNPY2Q9Y2B0 182 aa32.35■■■□□ 2.77
ATPAF1-201ENST00000329231 SYNGAP1Q96PV0 1343 aa32.34■■■□□ 2.77
ATPAF1-201ENST00000329231 PLXNA1Q9UIW2 1896 aa32.34■■■□□ 2.77
ATPAF1-201ENST00000329231 E7EWF7 191 aa32.34■■■□□ 2.77
ATPAF1-201ENST00000329231 MAMDC4Q6UXC1 1216 aa32.34■■■□□ 2.77
ATPAF1-201ENST00000329231 CYB5R4Q7L1T6 521 aa32.34■■■□□ 2.77
ATPAF1-201ENST00000329231 A1CFQ9NQ94 594 aaKnown RBP32.34■■■□□ 2.77
ATPAF1-201ENST00000329231 PFASO15067 1338 aa32.33■■■□□ 2.77
ATPAF1-201ENST00000329231 GOLGA8HP0CJ92 632 aa32.33■■■□□ 2.77
ATPAF1-201ENST00000329231 LSG1Q9H089 658 aaKnown RBP32.33■■■□□ 2.77
ATPAF1-201ENST00000329231 NR2E3Q9Y5X4 410 aa32.33■■■□□ 2.77
ATPAF1-201ENST00000329231 POTEB2H3BUK9 544 aa32.32■■■□□ 2.76
ATPAF1-201ENST00000329231 SEC23AQ15436 765 aa32.32■■■□□ 2.76
ATPAF1-201ENST00000329231 ASPRV1Q53RT3 343 aa32.32■■■□□ 2.76
ATPAF1-201ENST00000329231 CASC1Q6TDU7 716 aa32.32■■■□□ 2.76
ATPAF1-201ENST00000329231 MUM1L1Q5H9M0 696 aa32.31■■■□□ 2.76
ATPAF1-201ENST00000329231 TAF6LQ9Y6J9 622 aa32.31■■■□□ 2.76
ATPAF1-201ENST00000329231 ERICH2A1L162 156 aa32.3■■■□□ 2.76
ATPAF1-201ENST00000329231 EVI5O60447 810 aa32.3■■■□□ 2.76
ATPAF1-201ENST00000329231 PARP1P09874 1014 aaKnown RBP32.3■■■□□ 2.76
ATPAF1-201ENST00000329231 SART3Q15020 963 aaKnown RBP32.3■■■□□ 2.76
ATPAF1-201ENST00000329231 FAM133AQ8N9E0 248 aa32.3■■■□□ 2.76
ATPAF1-201ENST00000329231 ARRDC4Q8NCT1 418 aa32.3■■■□□ 2.76
ATPAF1-201ENST00000329231 ANO2Q9NQ90 1003 aa32.3■■■□□ 2.76
ATPAF1-201ENST00000329231 H0YGN5 161 aa32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 IFIT3O14879 490 aaKnown RBP32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 ZNF865P0CJ78 1059 aaPredicted RBP32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 COL6A1P12109 1028 aa32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 TAL1P17542 331 aaPredicted RBP32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 ANO1Q5XXA6 986 aa32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 STOX1Q6ZVD7 989 aa32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 FGD4Q96M96 766 aa32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 UBA5Q9GZZ9 404 aa32.29■■■□□ 2.76
ATPAF1-201ENST00000329231 WDR19Q8NEZ3 1342 aa32.28■■■□□ 2.76
ATPAF1-201ENST00000329231 DNM1LO00429 736 aa32.28■■■□□ 2.76
ATPAF1-201ENST00000329231 SNAI1O95863 264 aaPredicted RBP32.28■■■□□ 2.76
ATPAF1-201ENST00000329231 CNTN2Q02246 1040 aa32.28■■■□□ 2.76
ATPAF1-201ENST00000329231 NSMFQ6X4W1 530 aa32.28■■■□□ 2.76
ATPAF1-201ENST00000329231 PPP4R2Q9NY27 417 aa32.28■■■□□ 2.76
ATPAF1-201ENST00000329231 CYP39A1Q9NYL5 469 aa32.28■■■□□ 2.76
ATPAF1-201ENST00000329231 CDC45O75419 566 aa32.27■■■□□ 2.76
ATPAF1-201ENST00000329231 RARBP10826 455 aa32.27■■■□□ 2.76
ATPAF1-201ENST00000329231 AKR1A1P14550 325 aa32.27■■■□□ 2.76
ATPAF1-201ENST00000329231 CDKN2AIPQ9NXV6 580 aaPredicted RBP32.27■■■□□ 2.76
ATPAF1-201ENST00000329231 FRMPD3Q5JV73 1810 aa32.27■■■□□ 2.76
ATPAF1-201ENST00000329231 ARMCX2Q7L311 632 aa32.26■■■□□ 2.75
ATPAF1-201ENST00000329231 CPVLQ9H3G5 476 aa32.26■■■□□ 2.75
ATPAF1-201ENST00000329231 ABHD16BQ9H3Z7 469 aa32.26■■■□□ 2.75
ATPAF1-201ENST00000329231 WTAPQ15007 396 aa32.25■■■□□ 2.75
ATPAF1-201ENST00000329231 MB21D2Q8IYB1 491 aaPredicted RBP32.25■■■□□ 2.75
ATPAF1-201ENST00000329231 ZHX1Q9UKY1 873 aaPredicted RBP32.25■■■□□ 2.75
ATPAF1-201ENST00000329231 ASB14A6NK59 587 aa32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 KBTBD13C9JR72 458 aa32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 SLC27A2O14975 620 aa32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 ACVR2BQ13705 512 aa32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 NECTIN1Q15223 517 aa32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 GJC2Q5T442 439 aaPredicted RBP32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 CCDC144CPQ8IYA2 1237 aa32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 ADGRF4Q8IZF3 695 aa32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 FAM184BQ9ULE4 1060 aa32.24■■■□□ 2.75
ATPAF1-201ENST00000329231 SOWAHBA6NEL2 793 aa32.23■■■□□ 2.75
ATPAF1-201ENST00000329231 NFIBO00712 420 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms