RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 PDLIM7Q9NR12 457 aa9.96□□□□□ -0.82
MSL3-201ENST00000312196 IL17RBQ9NRM6 502 aa9.96□□□□□ -0.82
MSL3-201ENST00000312196 CTNNA3Q9UI47 895 aa9.96□□□□□ -0.82
MSL3-201ENST00000312196 CTDP1Q9Y5B0 961 aaPredicted RBP9.96□□□□□ -0.82
MSL3-201ENST00000312196 FGAP02671 866 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 HSPD1P10809 573 aaKnown RBP9.95□□□□□ -0.82
MSL3-201ENST00000312196 PLS1Q14651 629 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 WDR78Q5VTH9 848 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 ABHD16BQ9H3Z7 469 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 ZNF536O15090 1300 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 ADAMTS4O75173 837 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 GJA9P57773 515 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 NMIQ13287 307 aaPredicted RBP9.95□□□□□ -0.82
MSL3-201ENST00000312196 AKNAD1Q5T1N1 836 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 CCSAPQ6IQ19 270 aaPredicted RBP9.95□□□□□ -0.82
MSL3-201ENST00000312196 FGD4Q96M96 766 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 KATNBL1Q9H079 304 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 SEMA6BQ9H3T3 888 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 CNPY2Q9Y2B0 182 aa9.95□□□□□ -0.82
MSL3-201ENST00000312196 RBM47A0AV96 593 aaKnown RBP9.94□□□□□ -0.82
MSL3-201ENST00000312196 TSPY2A6NKD2 308 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 CABYRO75952 493 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 SNAI1O95863 264 aaPredicted RBP9.94□□□□□ -0.82
MSL3-201ENST00000312196 ICAM1P05362 532 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 CLTBP09497 229 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 NUP133Q8WUM0 1156 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 A0A0D9SFI3 127 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 SLC1A4P43007 532 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 GHRHRQ02643 423 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 RASIP1Q5U651 963 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 CCDC129Q6ZRS4 1044 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.94□□□□□ -0.82
MSL3-201ENST00000312196 PCSK9Q8NBP7 692 aaKnown RBP9.94□□□□□ -0.82
MSL3-201ENST00000312196 DDX11Q96FC9 970 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 MTA3Q9BTC8 594 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 VTA1Q9NP79 307 aa9.94□□□□□ -0.82
MSL3-201ENST00000312196 TMEM232C9JQI7 657 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 CNGA1P29973 690 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 CDK7P50613 346 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
MSL3-201ENST00000312196 GPATCH4Q5T3I0 446 aaKnown RBP9.93□□□□□ -0.82
MSL3-201ENST00000312196 IQSEC1Q6DN90 963 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 ESR2Q92731 530 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 NUP88Q99567 741 aaPredicted RBP9.93□□□□□ -0.82
MSL3-201ENST00000312196 CNNM2Q9H8M5 875 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 XPNPEP3Q9NQH7 507 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
MSL3-201ENST00000312196 PRR12Q9ULL5 1215 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 TRIOBPQ9H2D6 2365 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.93□□□□□ -0.82
MSL3-201ENST00000312196 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.93□□□□□ -0.82
MSL3-201ENST00000312196 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 PPIGQ13427 754 aaKnown RBP eCLIP9.93□□□□□ -0.82
MSL3-201ENST00000312196 ACVR2BQ13705 512 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 TRIM60Q495X7 471 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 SYDE2Q5VT97 1194 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 MFSD6Q6ZSS7 791 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 SLC43A3Q8NBI5 491 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 MAP3K20Q9NYL2 800 aaKnown RBP9.93□□□□□ -0.82
MSL3-201ENST00000312196 RIPK3Q9Y572 518 aa9.93□□□□□ -0.82
MSL3-201ENST00000312196 DCDC2CA8MYV0 355 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 B4DLN1 442 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 PRDM1O75626 825 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 IGHDP01880 384 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 ADCYAP1R1P41586 468 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 MRPL12P52815 198 aaKnown RBP9.92□□□□□ -0.82
MSL3-201ENST00000312196 ZNF543Q08ER8 600 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 SHHQ15465 462 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 FAM47AQ5JRC9 791 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 GJC2Q5T442 439 aaPredicted RBP9.92□□□□□ -0.82
MSL3-201ENST00000312196 LRRC47Q8N1G4 583 aaKnown RBP9.92□□□□□ -0.82
MSL3-201ENST00000312196 KIFC2Q96AC6 838 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 FAM227BQ96M60 508 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 TMEM47Q9BQJ4 181 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 KRT23Q9C075 422 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 RAVER2Q9HCJ3 691 aaKnown RBP9.92□□□□□ -0.82
MSL3-201ENST00000312196 RNF146Q9NTX7 359 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 ATP11BQ9Y2G3 1177 aa9.92□□□□□ -0.82
MSL3-201ENST00000312196 TRIM43BA6NCK2 446 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 NKRFO15226 690 aaKnown RBP eCLIP9.91□□□□□ -0.82
MSL3-201ENST00000312196 TIMP1P01033 207 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 TLE2Q04725 743 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 FPGSQ05932 587 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 TRAF1Q13077 416 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 VPS53Q5VIR6 699 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 TRIM43Q96BQ3 446 aaPredicted RBP9.91□□□□□ -0.82
MSL3-201ENST00000312196 MPHOSPH6Q99547 160 aaKnown RBP9.91□□□□□ -0.82
MSL3-201ENST00000312196 CDX2Q99626 313 aaPredicted RBP9.91□□□□□ -0.82
MSL3-201ENST00000312196 LNPKQ9C0E8 428 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 SPC25Q9HBM1 224 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 ADD3Q9UEY8 706 aaKnown RBP9.91□□□□□ -0.82
MSL3-201ENST00000312196 TBX21Q9UL17 535 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 HTTP42858 3142 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 LCTP09848 1927 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 A0A1W2PQ45 241 aaPredicted RBP9.91□□□□□ -0.82
MSL3-201ENST00000312196 A0A1W2PQY0 241 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 ZEB2O60315 1214 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 KPNA6O60684 536 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 ASPRV1Q53RT3 343 aa9.91□□□□□ -0.82
MSL3-201ENST00000312196 Q7L0L9 218 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms