RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SURF6O75683 361 aaKnown RBP14.3□□□□□ -0.12
SMIM4-201ENST00000307106 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
SMIM4-201ENST00000307106 POLA2Q14181 598 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 FAM83BQ5T0W9 1011 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 SLC43A3Q8NBI5 491 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 GOPCQ9HD26 462 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 RIPK3Q9Y572 518 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 LCTP09848 1927 aa14.3□□□□□ -0.12
SMIM4-201ENST00000307106 SLC4A3P48751 1232 aa14.29□□□□□ -0.12
SMIM4-201ENST00000307106 MRE11P49959 708 aa14.29□□□□□ -0.12
SMIM4-201ENST00000307106 NKX3-2P78367 333 aa14.29□□□□□ -0.12
SMIM4-201ENST00000307106 ITGA7Q13683 1181 aa14.29□□□□□ -0.12
SMIM4-201ENST00000307106 TRMT2AQ8IZ69 625 aaKnown RBP14.29□□□□□ -0.12
SMIM4-201ENST00000307106 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
SMIM4-201ENST00000307106 SCLYQ96I15 445 aa14.29□□□□□ -0.12
SMIM4-201ENST00000307106 CCDC17Q96LX7 622 aa14.29□□□□□ -0.12
SMIM4-201ENST00000307106 B4GALT4O60513 344 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 CABYRO75952 493 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 TTLL4Q14679 1199 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 ARMCX2Q7L311 632 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 LCORLQ8N3X6 602 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 SSH3Q8TE77 659 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 VWCEQ96DN2 955 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 SNX27Q96L92 541 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 FGD4Q96M96 766 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 SLF1Q9BQI6 1058 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 TRPV6Q9H1D0 765 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 CD320Q9NPF0 282 aa14.28□□□□□ -0.12
SMIM4-201ENST00000307106 ASTN1O14525 1302 aa14.27□□□□□ -0.12
SMIM4-201ENST00000307106 GRIN2DO15399 1336 aa14.27□□□□□ -0.12
SMIM4-201ENST00000307106 PRR33A8MZF0 331 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 PFKMP08237 780 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 PDE6AP16499 860 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 RARSP54136 660 aaKnown RBP14.27□□□□□ -0.13
SMIM4-201ENST00000307106 TNFAIP2Q03169 654 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 SLC9C2Q5TAH2 1124 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 NOL8Q76FK4 1167 aaKnown RBP14.27□□□□□ -0.13
SMIM4-201ENST00000307106 CCDC144CPQ8IYA2 1237 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 CPXCR1Q8N123 301 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 ANKRD35Q8N283 1001 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 AGBL1Q96MI9 1066 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 SEZ6LQ9BYH1 1024 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 KATNBL1Q9H079 304 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 KANSL2Q9H9L4 492 aa14.27□□□□□ -0.13
SMIM4-201ENST00000307106 ZNF532Q9HCE3 1301 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 SCN10AQ9Y5Y9 1956 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.26□□□□□ -0.13
SMIM4-201ENST00000307106 BCAR3O75815 825 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 TRIM27P14373 513 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 CDK8P49336 464 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 ATP8B2P98198 1209 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 TAP1Q03518 808 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 TTF1Q15361 905 aaPredicted RBP14.26□□□□□ -0.13
SMIM4-201ENST00000307106 FSCN1Q16658 493 aaKnown RBP14.26□□□□□ -0.13
SMIM4-201ENST00000307106 DEFB128Q7Z7B8 93 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 TLK2Q86UE8 772 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 SLC9A7Q96T83 725 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 NUP88Q99567 741 aaPredicted RBP14.26□□□□□ -0.13
SMIM4-201ENST00000307106 TNNQ9UQP3 1299 aa14.26□□□□□ -0.13
SMIM4-201ENST00000307106 ATP2A1O14983 1001 aa14.25□□□□□ -0.13
SMIM4-201ENST00000307106 ARHGEF15O94989 841 aa14.25□□□□□ -0.13
SMIM4-201ENST00000307106 PSMC6P62333 389 aa14.25□□□□□ -0.13
SMIM4-201ENST00000307106 GRB10Q13322 594 aa14.25□□□□□ -0.13
SMIM4-201ENST00000307106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMIM4-201ENST00000307106 GNEQ9Y223 722 aaKnown RBP14.25□□□□□ -0.13
SMIM4-201ENST00000307106 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
SMIM4-201ENST00000307106 WDFY4Q6ZS81 3184 aa14.25□□□□□ -0.13
SMIM4-201ENST00000307106 ZNF318Q5VUA4 2279 aa14.25□□□□□ -0.13
SMIM4-201ENST00000307106 CYP2D7A0A087X1C5 515 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 IPO8O15397 1037 aaKnown RBP14.24□□□□□ -0.13
SMIM4-201ENST00000307106 ZEB2O60315 1214 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 ACTN1P12814 892 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 C12orf60Q5U649 245 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 C16orf86Q6ZW13 317 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 AMOTL1Q8IY63 956 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
SMIM4-201ENST00000307106 CLUAP1Q96AJ1 413 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 UIMC1Q96RL1 719 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 AP5M1Q9H0R1 490 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 ARMT1Q9H993 441 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 RAVER2Q9HCJ3 691 aaKnown RBP14.24□□□□□ -0.13
SMIM4-201ENST00000307106 ATP8A2Q9NTI2 1148 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 FBXO40Q9UH90 709 aa14.24□□□□□ -0.13
SMIM4-201ENST00000307106 CTDP1Q9Y5B0 961 aaPredicted RBP14.24□□□□□ -0.13
SMIM4-201ENST00000307106 PRKAB2O43741 272 aa14.23□□□□□ -0.13
SMIM4-201ENST00000307106 LPXNO60711 386 aa14.23□□□□□ -0.13
SMIM4-201ENST00000307106 ZBED4O75132 1171 aa14.23□□□□□ -0.13
SMIM4-201ENST00000307106 PTGS1P23219 599 aa14.23□□□□□ -0.13
SMIM4-201ENST00000307106 NHLH1Q02575 133 aa14.23□□□□□ -0.13
SMIM4-201ENST00000307106 CHST13Q8NET6 341 aa14.23□□□□□ -0.13
SMIM4-201ENST00000307106 PHOSPHO2Q8TCD6 241 aa14.23□□□□□ -0.13
SMIM4-201ENST00000307106 ALDH8A1Q9H2A2 487 aaPredicted RBP14.23□□□□□ -0.13
SMIM4-201ENST00000307106 NLRC5Q86WI3 1866 aa14.23□□□□□ -0.13
SMIM4-201ENST00000307106 KIF28PB7ZC32 967 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 USP17L12C9JPN9 530 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 USP17L21D6R901 530 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 DYNC1LI2O43237 492 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms