RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 MORF4L1Q9UBU8 362 aa20.86■□□□□ 0.93
TMED3-201ENST00000299705 PNMA6FA0A0J9YX94 578 aa20.85■□□□□ 0.93
TMED3-201ENST00000299705 FMNL1O95466 1100 aaPredicted RBP20.85■□□□□ 0.93
TMED3-201ENST00000299705 SSRP1Q08945 709 aaKnown RBP20.85■□□□□ 0.93
TMED3-201ENST00000299705 TMEM132BQ14DG7 1078 aa20.85■□□□□ 0.93
TMED3-201ENST00000299705 TRIM22Q8IYM9 498 aa20.85■□□□□ 0.93
TMED3-201ENST00000299705 NSUN7Q8NE18 718 aaKnown RBP20.85■□□□□ 0.93
TMED3-201ENST00000299705 SAGE1Q9NXZ1 904 aa20.85■□□□□ 0.93
TMED3-201ENST00000299705 BTBD7Q9P203 1132 aa20.85■□□□□ 0.93
TMED3-201ENST00000299705 SEC63Q9UGP8 760 aaKnown RBP20.85■□□□□ 0.93
TMED3-201ENST00000299705 ZNF214Q9UL59 606 aaPredicted RBP20.85■□□□□ 0.93
TMED3-201ENST00000299705 V9GY48 417 aaPredicted RBP20.85■□□□□ 0.93
TMED3-201ENST00000299705 ZNF536O15090 1300 aa20.84■□□□□ 0.93
TMED3-201ENST00000299705 STK36Q9NRP7 1315 aa20.84■□□□□ 0.93
TMED3-201ENST00000299705 CNMDO75829 334 aa20.84■□□□□ 0.93
TMED3-201ENST00000299705 QRICH1Q2TAL8 776 aa20.84■□□□□ 0.93
TMED3-201ENST00000299705 C17orf99Q6UX52 265 aa20.84■□□□□ 0.93
TMED3-201ENST00000299705 PHKBQ93100 1093 aa20.84■□□□□ 0.93
TMED3-201ENST00000299705 COL11A1P12107 1806 aaPredicted RBP20.83■□□□□ 0.93
TMED3-201ENST00000299705 ICAM1P05362 532 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 BCRP11274 1271 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 SNAP25P60880 206 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 AKAP17AQ02040 695 aaKnown RBP20.83■□□□□ 0.93
TMED3-201ENST00000299705 TRAF1Q13077 416 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 FAM110CQ1W6H9 321 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 HOMER1Q86YM7 354 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 SMARCC2Q8TAQ2 1214 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 SLC26A6Q9BXS9 759 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 TXNRD2Q9NNW7 524 aa20.83■□□□□ 0.93
TMED3-201ENST00000299705 TRPA1O75762 1119 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 ERVK-9P63128 1117 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 ERVK-24P63145 666 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 BECN1Q14457 450 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 FBXO11Q86XK2 927 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 ANKRD13CQ8N6S4 541 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 GPRC5AQ8NFJ5 357 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 INTS4Q96HW7 963 aaKnown RBP20.82■□□□□ 0.92
TMED3-201ENST00000299705 PAGR1Q9BTK6 254 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 AMNQ9BXJ7 453 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 TEX13BQ9BXU2 312 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 SPATC1LQ9H0A9 340 aa20.82■□□□□ 0.92
TMED3-201ENST00000299705 RAVER2Q9HCJ3 691 aaKnown RBP20.82■□□□□ 0.92
TMED3-201ENST00000299705 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.82■□□□□ 0.92
TMED3-201ENST00000299705 BAZ2BQ9UIF8 2168 aaKnown RBP20.82■□□□□ 0.92
TMED3-201ENST00000299705 PTPDC1A2A3K4 754 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 DEXIO95424 95 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 STAT3P40763 770 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 HMGN5P82970 282 aaKnown RBP20.81■□□□□ 0.92
TMED3-201ENST00000299705 PFKFB3Q16875 520 aaPredicted RBP20.81■□□□□ 0.92
TMED3-201ENST00000299705 CCDC174Q6PII3 467 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 RIOX2Q8IUF8 465 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 CPXCR1Q8N123 301 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 PIBF1Q8WXW3 757 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 CPA4Q9UI42 421 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 hCG_1984214I3L0E3 225 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 PPP1R11O60927 126 aaPredicted RBP20.81■□□□□ 0.92
TMED3-201ENST00000299705 ANP32AP39687 249 aaKnown RBP20.81■□□□□ 0.92
TMED3-201ENST00000299705 PKN1Q16512 942 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 Q3C1V9 767 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 SNRNP48Q6IEG0 339 aaKnown RBP20.81■□□□□ 0.92
TMED3-201ENST00000299705 ZNF713Q8N859 430 aaPredicted RBP20.81■□□□□ 0.92
TMED3-201ENST00000299705 AGBL1Q96MI9 1066 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 BEGAINQ9BUH8 593 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 WBP1LQ9NX94 342 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 ORC3Q9UBD5 711 aaPredicted RBP20.81■□□□□ 0.92
TMED3-201ENST00000299705 CCPG1Q9ULG6 757 aa20.81■□□□□ 0.92
TMED3-201ENST00000299705 RBM19Q9Y4C8 960 aaKnown RBP20.81■□□□□ 0.92
TMED3-201ENST00000299705 hCG_1642624A0A1W2PR95 340 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 JAK2O60674 1132 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 SLC25A27O95847 323 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 SCG2P13521 617 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 FDPSP14324 419 aaKnown RBP20.8■□□□□ 0.92
TMED3-201ENST00000299705 COPB2P35606 906 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 CCNA1P78396 465 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 PLS1Q14651 629 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 TKFCQ3LXA3 575 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 R3HDMLQ9H3Y0 253 aa20.8■□□□□ 0.92
TMED3-201ENST00000299705 MYH6P13533 1939 aa20.79■□□□□ 0.92
TMED3-201ENST00000299705 PPFIA3O75145 1194 aa20.79■□□□□ 0.92
TMED3-201ENST00000299705 TBC1D8O95759 1140 aa20.79■□□□□ 0.92
TMED3-201ENST00000299705 NOM1Q5C9Z4 860 aaKnown RBP20.79■□□□□ 0.92
TMED3-201ENST00000299705 SHCBP1Q8NEM2 672 aa20.79■□□□□ 0.92
TMED3-201ENST00000299705 WASF1Q92558 559 aa20.79■□□□□ 0.92
TMED3-201ENST00000299705 MOV10L1Q9BXT6 1211 aaKnown RBP20.79■□□□□ 0.92
TMED3-201ENST00000299705 PCDHA1Q9Y5I3 950 aa20.79■□□□□ 0.92
TMED3-201ENST00000299705 ABCB11O95342 1321 aa20.79■□□□□ 0.92
TMED3-201ENST00000299705 PEX10O60683 326 aa20.78■□□□□ 0.92
TMED3-201ENST00000299705 BARHL2Q9NY43 387 aa20.78■□□□□ 0.92
TMED3-201ENST00000299705 RIPK3Q9Y572 518 aa20.78■□□□□ 0.92
TMED3-201ENST00000299705 USH1GQ495M9 461 aa20.77■□□□□ 0.92
TMED3-201ENST00000299705 FAM177A1Q8N128 213 aaPredicted RBP20.77■□□□□ 0.92
TMED3-201ENST00000299705 CHST13Q8NET6 341 aa20.77■□□□□ 0.92
TMED3-201ENST00000299705 DDX11Q96FC9 970 aa20.77■□□□□ 0.92
TMED3-201ENST00000299705 MROH8Q9H579 483 aa20.77■□□□□ 0.92
TMED3-201ENST00000299705 SH3GLB2Q9NR46 395 aa20.77■□□□□ 0.92
TMED3-201ENST00000299705 SMC3Q9UQE7 1217 aa20.77■□□□□ 0.92
TMED3-201ENST00000299705 MRPL11Q9Y3B7 192 aaKnown RBP20.77■□□□□ 0.92
TMED3-201ENST00000299705 KIF3AQ9Y496 699 aa20.77■□□□□ 0.92
TMED3-201ENST00000299705 ALAS1P13196 640 aa20.76■□□□□ 0.91
TMED3-201ENST00000299705 WWC2Q6AWC2 1192 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms