RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 SF3A3Q12874 501 aaKnown RBP eCLIP17.7■□□□□ 0.424e-7■■■■□ 22.2
ARHGEF28-201ENST00000296794 CCDC105Q8IYK2 499 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 PDLIM2Q96JY6 352 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 PPFIA4O75335 1185 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 CLEC17AQ6ZS10 378 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 BRINP3Q76B58 766 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 PNMA8AQ86V59 439 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 SLC39A2Q9NP94 309 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 ANKARQ7Z5J8 1434 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 A0A1B0GUA9 196 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 ATP11AP98196 1134 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 STRN3Q13033 797 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 U2AF1L4Q8WU68 220 aaKnown RBP17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 EXOC7Q9UPT5 735 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 ENC1O14682 589 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 ATP1A2P50993 1020 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 VSTM4Q8IW00 320 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 HINFPQ9BQA5 517 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 SHROOM2Q13796 1616 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 TCP10L2B9ZVM9 353 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 ARID5BQ14865 1188 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 NEK8Q86SG6 692 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 GPBP1Q86WP2 473 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 CAPS2Q9BXY5 557 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 RNF26Q9BY78 433 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 AMFRQ9UKV5 643 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 CEP128Q6ZU80 1094 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 BCAS4Q8TDM0 211 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 BCRP11274 1271 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 XRCC5P13010 732 aaKnown RBP17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 ARHGAP44Q17R89 818 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 TRIM6Q9C030 488 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 RAB17Q9H0T7 212 aa17.69■□□□□ 0.42
ARHGEF28-201ENST00000296794 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 SLC8A3P57103 927 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 LIN9Q5TKA1 542 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 PI16Q6UXB8 463 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 PUS7LQ9H0K6 701 aaKnown RBP17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 KDM3AQ9Y4C1 1321 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 FAM170AA1A519 330 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 KLRF2D3W0D1 207 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 GOLGA8HP0CJ92 632 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 CLUL1Q15846 466 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 CERKLQ49MI3 558 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 DENND2CQ68D51 928 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 PLCD3Q8N3E9 789 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 ANKRD13CQ8N6S4 541 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 PAGR1Q9BTK6 254 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 PLCB1Q9NQ66 1216 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 AGTPBP1Q9UPW5 1226 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 ATP1A3P13637 1013 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 CLCN6P51797 869 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 TOB2Q14106 344 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 CCDC117Q8IWD4 279 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 KIF2CQ99661 725 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 TUBGCP2Q9BSJ2 902 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 TXNDC16Q9P2K2 825 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 ADD2P35612 726 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 BTDP43251 543 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 PPFIBP2Q8ND30 876 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 SAMSN1Q9NSI8 373 aaKnown RBP17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 PNMA2Q9UL42 364 aa17.68■□□□□ 0.42
ARHGEF28-201ENST00000296794 NR5A1Q13285 461 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 GNPTABQ3T906 1256 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 NLRX1Q86UT6 975 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 ATP8A2Q9NTI2 1148 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 MYO1AQ9UBC5 1043 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 DDX39AO00148 427 aaKnown RBP17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 KRIT1O00522 736 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 SH2B2O14492 632 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 BUB1BO60566 1050 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 MMP1P03956 469 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 STAT1P42224 750 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 POLR2FP61218 127 aaKnown RBP17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 PTPROQ16827 1216 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 GALNT17Q6IS24 598 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 ENOX1Q8TC92 643 aaKnown RBP17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 CNOT6LQ96LI5 555 aaKnown RBP17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 FAM204AQ9H8W3 233 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 VGLL3A8MV65 326 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 SLFN14P0C7P3 912 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 FBXO38Q6PIJ6 1188 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 ABCB4P21439 1286 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 KIF22Q14807 665 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 FYB2Q5VWT5 728 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 SARM1Q6SZW1 724 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 CDAN1Q8IWY9 1227 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 AIFM3Q96NN9 605 aa17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 MAK16Q9BXY0 300 aaKnown RBP17.67■□□□□ 0.42
ARHGEF28-201ENST00000296794 SOWAHDA6NJG2 315 aa17.66■□□□□ 0.42
ARHGEF28-201ENST00000296794 SEMA3EO15041 775 aa17.66■□□□□ 0.42
ARHGEF28-201ENST00000296794 VSIG1Q86XK7 387 aa17.66■□□□□ 0.42
ARHGEF28-201ENST00000296794 STMN2Q93045 179 aa17.66■□□□□ 0.42
ARHGEF28-201ENST00000296794 CAPN7Q9Y6W3 813 aa17.66■□□□□ 0.42
ARHGEF28-201ENST00000296794 M0QZ92 97 aa17.66■□□□□ 0.42
ARHGEF28-201ENST00000296794 ARMCX3Q9UH62 379 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms