RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 CAP2P40123 477 aa23.46■■□□□ 1.35
LYSMD2-201ENST00000267838 ATP2C1P98194 919 aaPredicted RBP23.46■■□□□ 1.35
LYSMD2-201ENST00000267838 PPP1R18Q6NYC8 613 aa23.46■■□□□ 1.35
LYSMD2-201ENST00000267838 KRT25Q7Z3Z0 450 aa23.46■■□□□ 1.35
LYSMD2-201ENST00000267838 FERMT2Q96AC1 680 aa23.46■■□□□ 1.35
LYSMD2-201ENST00000267838 TEPSINQ96N21 525 aa23.46■■□□□ 1.35
LYSMD2-201ENST00000267838 FAM13BQ9NYF5 915 aa23.46■■□□□ 1.35
LYSMD2-201ENST00000267838 HACL1Q9UJ83 578 aa23.46■■□□□ 1.35
LYSMD2-201ENST00000267838 PTGDRQ13258 359 aa23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 SPECC1Q5M775 1068 aa23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 KCNH3Q9ULD8 1083 aa23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 H7C1D1 291 aa23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 PPP1R11O60927 126 aaPredicted RBP23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 ASTN2O75129 1339 aaPredicted RBP23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 SBF1O95248 1867 aa23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 MCM7P33993 719 aa23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 CSRNP2Q9H175 543 aa23.45■■□□□ 1.34
LYSMD2-201ENST00000267838 BMP3P12645 472 aa23.44■■□□□ 1.34
LYSMD2-201ENST00000267838 ECE1P42892 770 aa23.44■■□□□ 1.34
LYSMD2-201ENST00000267838 ADCY7P51828 1080 aa23.44■■□□□ 1.34
LYSMD2-201ENST00000267838 INF2Q27J81 1249 aa23.44■■□□□ 1.34
LYSMD2-201ENST00000267838 NUP88Q99567 741 aaPredicted RBP23.44■■□□□ 1.34
LYSMD2-201ENST00000267838 TMX2Q9Y320 296 aa23.44■■□□□ 1.34
LYSMD2-201ENST00000267838 REXO1Q8N1G1 1221 aaKnown RBP23.43■■□□□ 1.34
LYSMD2-201ENST00000267838 ACER1Q8TDN7 264 aa23.43■■□□□ 1.34
LYSMD2-201ENST00000267838 HSP90AA2PQ14568 343 aaPredicted RBP23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 NONOQ15233 471 aaKnown RBP eCLIP23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 ANO6Q4KMQ2 910 aa23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 GPC2Q8N158 579 aa23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 GOPCQ9HD26 462 aa23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 ATAD5Q96QE3 1844 aa23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 CDC37Q16543 378 aaPredicted RBP23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 QRICH1Q2TAL8 776 aa23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 RIC8AQ9NPQ8 531 aa23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 GPRC5DQ9NZD1 345 aa23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 BIN2Q9UBW5 565 aaPredicted RBP23.42■■□□□ 1.34
LYSMD2-201ENST00000267838 SRCAPQ6ZRS2 3230 aa23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 PHF20L1A8MW92 1017 aa23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 TMEM232C9JQI7 657 aa23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 ASNSP08243 561 aa23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 BTNL9Q6UXG8 535 aa23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 FAM200AQ8TCP9 573 aa23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 SYT17Q9BSW7 474 aa23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 DEFB129Q9H1M3 183 aa23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.41■■□□□ 1.34
LYSMD2-201ENST00000267838 IKQ13123 557 aaPredicted RBP23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 STX1AQ16623 288 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 SYDE2Q5VT97 1194 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 JAKMIP3Q5VZ66 844 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 ARL6IP4Q66PJ3 421 aaKnown RBP23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 SPICE1Q8N0Z3 855 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 C4orf32Q8N8J7 132 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 ERCC4Q92889 916 aaPredicted RBP23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 TMEM260Q9NX78 707 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 KIAA1468Q9P260 1216 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 LONRF3Q496Y0 759 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 KRBA2Q6ZNG9 492 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 SH2D4AQ9H788 454 aa23.4■■□□□ 1.34
LYSMD2-201ENST00000267838 VWA3AA6NCI4 1184 aa23.39■■□□□ 1.33
LYSMD2-201ENST00000267838 KIAA1755Q5JYT7 1200 aa23.39■■□□□ 1.33
LYSMD2-201ENST00000267838 TRPM4Q8TD43 1214 aa23.39■■□□□ 1.33
LYSMD2-201ENST00000267838 UBE2Q2Q8WVN8 375 aa23.39■■□□□ 1.33
LYSMD2-201ENST00000267838 CUL5Q93034 780 aa23.39■■□□□ 1.33
LYSMD2-201ENST00000267838 USP49Q70CQ1 688 aa23.38■■□□□ 1.33
LYSMD2-201ENST00000267838 NEK8Q86SG6 692 aa23.38■■□□□ 1.33
LYSMD2-201ENST00000267838 APOBEC3FQ8IUX4 373 aaKnown RBP23.38■■□□□ 1.33
LYSMD2-201ENST00000267838 CNNM3Q8NE01 707 aa23.38■■□□□ 1.33
LYSMD2-201ENST00000267838 DNAJC25Q9H1X3 360 aa23.38■■□□□ 1.33
LYSMD2-201ENST00000267838 VCPKMTQ9H867 229 aa23.38■■□□□ 1.33
LYSMD2-201ENST00000267838 POLR2DO15514 142 aaKnown RBP23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 CAVIN2O95810 425 aa23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 MRPL12P52815 198 aaKnown RBP23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 ANGEL2Q5VTE6 544 aaKnown RBP23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 ELOA2Q8IYF1 753 aaPredicted RBP23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 TBCKQ8TEA7 893 aa23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 SYMPKQ92797 1274 aaKnown RBP23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 PCDHA1Q9Y5I3 950 aa23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 IL17AQ16552 155 aa23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 GLIPR1L2Q4G1C9 344 aa23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 EPSTI1Q96J88 318 aa23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 PSTPIP2Q9H939 334 aa23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 ANO10Q9NW15 660 aa23.37■■□□□ 1.33
LYSMD2-201ENST00000267838 LAD1O00515 517 aa23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 CLK2P49760 499 aaKnown RBP23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 STAT2P52630 851 aa23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 LETM2Q2VYF4 491 aa23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 FAM83BQ5T0W9 1011 aa23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 NBPF12Q5TAG4 269 aaPredicted RBP23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 AMNQ9BXJ7 453 aa23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 GLT8D2Q9H1C3 349 aa23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 CBX8Q9HC52 389 aa23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 GINM1Q9NU53 330 aa23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 R3HCC1Q9Y3T6 440 aaKnown RBP23.36■■□□□ 1.33
LYSMD2-201ENST00000267838 SOCS7O14512 581 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 CCNT1O60563 726 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 CTNND1O60716 968 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 EPS15P42566 896 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 SNAP25P60880 206 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 UBE2SQ16763 222 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms