RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 GOLGA6L10A6NI86 522 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 ATP1A2P50993 1020 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 ABHD10Q9NUJ1 306 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 CASP8Q14790 479 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 TCP11X2Q5H9J9 407 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 MARCH10Q8NA82 808 aaPredicted RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 SNX29Q8TEQ0 813 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 CNOT6LQ96LI5 555 aaKnown RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 PYM1Q9BRP8 204 aaKnown RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 NAA15Q9BXJ9 866 aaKnown RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 CCDC113Q9H0I3 377 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 GOPCQ9HD26 462 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 STK32BQ9NY57 414 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 TMOD2Q9NZR1 351 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 DCCP43146 1447 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 H2AFXP16104 143 aaPredicted RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 GUCY2FP51841 1108 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 KRT79Q5XKE5 535 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 AFAP1L1Q8TED9 768 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 GJD4Q96KN9 370 aaPredicted RBP18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 ANKRD2Q9GZV1 360 aa18.06■□□□□ 0.48
PDZRN3-201ENST00000263666 SHTN1A0MZ66 631 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 CCDC151A5D8V7 595 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 UFL1O94874 794 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 ABL1P00519 1130 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 GNAQP50148 359 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 TRIM28Q13263 835 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 TMTC3Q6ZXV5 915 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 SV2BQ7L1I2 683 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 TAX1BP1Q86VP1 789 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 KLHL7Q8IXQ5 586 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 WNT7AO00755 349 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 ZNF185O15231 689 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 RXRBP28702 533 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 HPDP32754 393 aaPredicted RBP18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 MAP3K9P80192 1104 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 NR1I3Q14994 352 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 RAB34Q9BZG1 259 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 RASSF4Q9H2L5 321 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 LUC7LQ9NQ29 371 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 GYPCP04921 128 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 USP8P40818 1118 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 KLK7P49862 253 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 DCAF17Q5H9S7 520 aaPredicted RBP18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 EHBP1Q8NDI1 1231 aa18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 FAM208AQ9UK61 1670 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-201ENST00000263666 SASH3O75995 380 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 PLS1Q14651 629 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 ZNF804AQ7Z570 1209 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 PANX2Q96RD6 677 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 ZNF287Q9HBT7 754 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 SMARCAL1Q9NZC9 954 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 SMIM23A6NLE4 172 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 PLCG1P19174 1290 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 NONOQ15233 471 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 ZFYVE27Q5T4F4 411 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 COA7Q96BR5 231 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 TBC1D8O95759 1140 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 TRIM31Q9BZY9 425 aa18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 ADD3Q9UEY8 706 aaKnown RBP18.04■□□□□ 0.48
PDZRN3-201ENST00000263666 TRIM66O15016 1216 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 RASGRP2Q7LDG7 609 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 PNKPQ96T60 521 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 BICDL2A1A5D9 508 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 SPATA31A1Q5TZJ5 1347 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 GOLGA6CA6NDK9 693 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 H7C1D1 291 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 GOLGA6DP0CG33 693 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 ZNF772Q68DY9 489 aaPredicted RBP18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 CERS3Q8IU89 383 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 GOLGA6AQ9NYA3 693 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 ABCC12Q96J65 1359 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 A0A1B0GTH6 734 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 GOLGA6BA6NDN3 693 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 KCTD19Q17RG1 926 aaPredicted RBP18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 CT47A1Q5JQC4 288 aaPredicted RBP18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 ZNF658Q5TYW1 1059 aaPredicted RBP18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 SLF2Q8IX21 1173 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 FAM76AQ8TAV0 307 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 EYA3Q99504 573 aa18.03■□□□□ 0.48
PDZRN3-201ENST00000263666 HSF2BPO75031 334 aa18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 MOCS3O95396 460 aa18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 FCER1AP12319 257 aa18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 AGPAT5Q9NUQ2 364 aa18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 NWD1Q149M9 1564 aa18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 ATP1A1P05023 1023 aaKnown RBP18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 SETQ01105 290 aaPredicted RBP18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 WHAMMP3Q1A5X7 153 aa18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
PDZRN3-201ENST00000263666 RNF40O75150 1001 aa18.02■□□□□ 0.47
PDZRN3-201ENST00000263666 MCM3P25205 808 aa18.02■□□□□ 0.47
PDZRN3-201ENST00000263666 GNA11P29992 359 aa18.02■□□□□ 0.47
PDZRN3-201ENST00000263666 RASSF7Q02833 373 aa18.02■□□□□ 0.47
PDZRN3-201ENST00000263666 DCP1AQ9NPI6 582 aaPredicted RBP18.02■□□□□ 0.47
PDZRN3-201ENST00000263666 STK36Q9NRP7 1315 aa18.02■□□□□ 0.47
PDZRN3-201ENST00000263666 C8orf74Q6P047 294 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms