RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 PATL2C9JE40 543 aaKnown RBP13.9□□□□□ -0.18
NR1D1-201ENST00000246672 PPP1R12AO14974 1030 aaPredicted RBP13.9□□□□□ -0.18
NR1D1-201ENST00000246672 MBD4O95243 580 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 SSBP05455 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
NR1D1-201ENST00000246672 TCIRG1Q13488 830 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 FAM228AQ86W67 206 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 SYNE4Q8N205 404 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 AGPAT5Q9NUQ2 364 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 FBXO3Q9UK99 471 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 CAPN11Q9UMQ6 739 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.9□□□□□ -0.18
NR1D1-201ENST00000246672 ZNF330Q9Y3S2 320 aaPredicted RBP13.9□□□□□ -0.18
NR1D1-201ENST00000246672 LRP6O75581 1613 aa13.9□□□□□ -0.18
NR1D1-201ENST00000246672 TRIM49BA6NDI0 452 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 PRKAB2O43741 272 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 PARP1P09874 1014 aaKnown RBP13.89□□□□□ -0.19
NR1D1-201ENST00000246672 PHKA1P46020 1223 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 ALX1Q15699 326 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 HAUS3Q68CZ6 603 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
NR1D1-201ENST00000246672 CCDC43Q96MW1 224 aaKnown RBP13.89□□□□□ -0.19
NR1D1-201ENST00000246672 PURBQ96QR8 312 aaKnown RBP13.89□□□□□ -0.19
NR1D1-201ENST00000246672 KRT23Q9C075 422 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
NR1D1-201ENST00000246672 SLC24A3Q9HC58 644 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.19
NR1D1-201ENST00000246672 STIM2Q9P246 746 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 NID2Q14112 1375 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 PARP4Q9UKK3 1724 aaKnown RBP13.89□□□□□ -0.19
NR1D1-201ENST00000246672 FRMD3A2A2Y4 597 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 CXCR5P32302 372 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
NR1D1-201ENST00000246672 PPARDQ03181 441 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 TEX11Q8IYF3 940 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 ZNF654Q8IZM8 581 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 KIRREL3Q8IZU9 778 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 CAVIN3Q969G5 261 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 FERMT2Q96AC1 680 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 CCDC114Q96M63 670 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 CNNM2Q9H8M5 875 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 RIPOR2Q9Y4F9 1068 aa13.89□□□□□ -0.19
NR1D1-201ENST00000246672 NR1D1P20393 614 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 CYLC1P35663 651 aaPredicted RBP13.88□□□□□ -0.19
NR1D1-201ENST00000246672 KRT2P35908 639 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 PRCPP42785 496 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 SNCBQ16143 134 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 SPRED3Q2MJR0 410 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 C6orf89Q6UWU4 347 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 IQCKQ8N0W5 287 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 CAPN6Q9Y6Q1 641 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 ERICH2A1L162 156 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 E7EVH7 732 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 IPO7O95373 1038 aaKnown RBP13.88□□□□□ -0.19
NR1D1-201ENST00000246672 FAM153BP0C7A2 387 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
NR1D1-201ENST00000246672 KIF5AQ12840 1032 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 PTGDRQ13258 359 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 MEA1Q16626 185 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 FAM153CQ494X1 144 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 CFAP58Q5T655 872 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 CYB5D1Q6P9G0 228 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 PARP9Q8IXQ6 854 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 FUKQ8N0W3 1084 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 FAM153AQ9UHL3 310 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 ITIH3Q06033 890 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 E2F5Q15329 346 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
NR1D1-201ENST00000246672 NFRKBQ6P4R8 1299 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 KRT28Q7Z3Y7 464 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 KRT26Q7Z3Y9 468 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 MAGEB6Q8N7X4 407 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 ZNF507Q8TCN5 953 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 LRWD1Q9UFC0 647 aa13.88□□□□□ -0.19
NR1D1-201ENST00000246672 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 GSG1L2A8MUP6 293 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 TMCO5BA8MYB1 307 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 FAM107AO95990 144 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 CRYMQ14894 314 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 PKN1Q16512 942 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 NAIF1Q69YI7 327 aaPredicted RBP13.87□□□□□ -0.19
NR1D1-201ENST00000246672 ZNF572Q7Z3I7 529 aaPredicted RBP13.87□□□□□ -0.19
NR1D1-201ENST00000246672 TTLL11Q8NHH1 800 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 RUBCNQ92622 972 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 PHF20Q9BVI0 1012 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 MLXIPQ9HAP2 919 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 CNNM1Q9NRU3 951 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 CHD4Q14839 1912 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 A0A1W2PQC6 194 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 DNM1LO00429 736 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 ZNF263O14978 683 aa13.87□□□□□ -0.19
NR1D1-201ENST00000246672 GTPBP6O43824 516 aaPredicted RBP13.87□□□□□ -0.19
NR1D1-201ENST00000246672 RPN1P04843 607 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms