RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SOS2Q07890 1332 aaPredicted RBP25.54■■□□□ 1.68
TARBP1-201ENST00000040877 MTMR3Q13615 1198 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 RASA3Q14644 834 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 SLC39A14Q15043 492 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 ARHGAP44Q17R89 818 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 CSRNP1Q96S65 589 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 SERPINB13Q9UIV8 391 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 PCDHA4Q9UN74 947 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 CYP2J2P51589 502 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 TYW1BQ6NUM6 668 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 K7ENM7 598 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 RPN1P04843 607 aaKnown RBP25.53■■□□□ 1.68
TARBP1-201ENST00000040877 PTPN12Q05209 780 aaKnown RBP25.53■■□□□ 1.68
TARBP1-201ENST00000040877 LGSNQ5TDP6 509 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 GSDMAQ96QA5 445 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 TRIM37O94972 964 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 TNNC2P02585 160 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 KIF22Q14807 665 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 DAAM2Q86T65 1068 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 SPATA24Q86W54 205 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 PARP2Q9UGN5 583 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 AMFRQ9UKV5 643 aa25.53■■□□□ 1.68
TARBP1-201ENST00000040877 CCNA1P78396 465 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 PIGBQ92521 554 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 SEC31BQ9NQW1 1179 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 C1orf112Q9NSG2 853 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 ATF7P17544 494 aaPredicted RBP25.52■■□□□ 1.68
TARBP1-201ENST00000040877 TMOD1P28289 359 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 HOXA7P31268 230 aaPredicted RBP25.52■■□□□ 1.68
TARBP1-201ENST00000040877 CCDC110Q8TBZ0 833 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 UIMC1Q96RL1 719 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 SPATA31A3Q5VYP0 1347 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.52■■□□□ 1.68
TARBP1-201ENST00000040877 GADL1Q6ZQY3 521 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 ANAPC4Q9UJX5 808 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 SUPT20HL1Q3ZLR7 823 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 MRFAP1L1Q96HT8 127 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 POLR3EQ9NVU0 708 aa25.52■■□□□ 1.68
TARBP1-201ENST00000040877 DMP1Q13316 513 aaPredicted RBP25.51■■□□□ 1.68
TARBP1-201ENST00000040877 USTQ9Y2C2 406 aa25.51■■□□□ 1.68
TARBP1-201ENST00000040877 PPP1R21Q6ZMI0 780 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 JPH2Q9BR39 696 aaPredicted RBP25.51■■□□□ 1.67
TARBP1-201ENST00000040877 POLA2Q14181 598 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 UAP1Q16222 522 aaPredicted RBP25.51■■□□□ 1.67
TARBP1-201ENST00000040877 RASEFQ8IZ41 740 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 MICALL1Q8N3F8 863 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 GRAPQ13588 217 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 GRAPLQ8TC17 118 aaPredicted RBP25.51■■□□□ 1.67
TARBP1-201ENST00000040877 RAB17Q9H0T7 212 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 ITIH3Q06033 890 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 DNAJC21Q5F1R6 531 aaKnown RBP25.51■■□□□ 1.67
TARBP1-201ENST00000040877 RDH13Q8NBN7 331 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 SYMPKQ92797 1274 aaKnown RBP25.51■■□□□ 1.67
TARBP1-201ENST00000040877 NACA2Q9H009 215 aa25.51■■□□□ 1.67
TARBP1-201ENST00000040877 METTL13Q8N6R0 699 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 BSDC1Q9NW68 430 aaPredicted RBP25.5■■□□□ 1.67
TARBP1-201ENST00000040877 PPP2R5AQ15172 486 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 CCDC105Q8IYK2 499 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 ATP6V0A1Q93050 837 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 CARMIL3Q8ND23 1372 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 PALLDQ8WX93 1383 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 AFAP1L1Q8TED9 768 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 M0R2C6 588 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 CCDC93Q567U6 631 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 FYB2Q5VWT5 728 aa25.5■■□□□ 1.67
TARBP1-201ENST00000040877 H7C1W4 665 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 INTS8Q75QN2 995 aaKnown RBP25.49■■□□□ 1.67
TARBP1-201ENST00000040877 WDR11Q9BZH6 1224 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 RNASE9P60153 205 aaKnown RBP25.49■■□□□ 1.67
TARBP1-201ENST00000040877 KCTD2Q14681 263 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 ADCK5Q3MIX3 580 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 MYL1P05976 194 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 NPR1P16066 1061 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 U2AF1L4Q8WU68 220 aaKnown RBP25.49■■□□□ 1.67
TARBP1-201ENST00000040877 RIOK1Q9BRS2 568 aaKnown RBP25.49■■□□□ 1.67
TARBP1-201ENST00000040877 TTC31Q49AM3 519 aaPredicted RBP25.49■■□□□ 1.67
TARBP1-201ENST00000040877 NCAPG2Q86XI2 1143 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 C10orf67Q8IYJ2 551 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 FAM184BQ9ULE4 1060 aa25.49■■□□□ 1.67
TARBP1-201ENST00000040877 PRAMEF22A3QJZ6 481 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 NSUN7Q8NE18 718 aaKnown RBP25.48■■□□□ 1.67
TARBP1-201ENST00000040877 SAR1BQ9Y6B6 198 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 CHD1O14646 1710 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 PTCH1Q13635 1447 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 YARSP54577 528 aaKnown RBP25.48■■□□□ 1.67
TARBP1-201ENST00000040877 WHAMMP3Q1A5X7 153 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 ARMCX5Q6P1M9 558 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 LPXNO60711 386 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 GAP43P17677 238 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 ERCC3P19447 782 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 ABCD1P33897 745 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 ADAM9Q13443 819 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 IFNAR1P17181 557 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 CCT6BQ92526 530 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 RASSF4Q9H2L5 321 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 MYO1AQ9UBC5 1043 aa25.48■■□□□ 1.67
TARBP1-201ENST00000040877 TFDP1Q14186 410 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 CDHR1Q96JP9 859 aa25.47■■□□□ 1.67
TARBP1-201ENST00000040877 POLGP54098 1239 aaPredicted RBP25.47■■□□□ 1.67
TARBP1-201ENST00000040877 BRINP3Q76B58 766 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms