RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 PRPF4BQ13523 1007 aaKnown RBP4.73□□□□□ -1.65
CFTR-201ENST00000003084 APOBEC3FQ8IUX4 373 aaKnown RBP4.73□□□□□ -1.65
CFTR-201ENST00000003084 OTUD7AQ8TE49 926 aaPredicted RBP4.73□□□□□ -1.65
CFTR-201ENST00000003084 GTF3C6Q969F1 213 aa4.73□□□□□ -1.65
CFTR-201ENST00000003084 MAK16Q9BXY0 300 aaKnown RBP4.73□□□□□ -1.65
CFTR-201ENST00000003084 SPATA31D1Q6ZQQ2 1576 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 SPATA31A1Q5TZJ5 1347 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 MACROD2A1Z1Q3 448 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 ATP2A1O14983 1001 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 GAS8O95995 478 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 TNNT1P13805 278 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 PPM1FP49593 454 aaPredicted RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 SMC1AQ14683 1233 aaKnown RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 PROSER3Q2NL68 480 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 RSPH3Q86UC2 560 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 MLKLQ8NB16 471 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 DYDC1Q8WWB3 177 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 EAF2Q96CJ1 260 aaPredicted RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 CSRNP1Q96S65 589 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 SGIP1Q9BQI5 828 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 STMN4Q9H169 189 aaPredicted RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 OSBPL3Q9H4L5 887 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 JADE2Q9NQC1 790 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 PI4KBQ9UBF8 816 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.72□□□□□ -1.65
CFTR-201ENST00000003084 PCDHGA4Q9Y5G9 962 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 IKBKGQ9Y6K9 419 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 UQCRHLA0A096LP55 91 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 TRAF5O00463 557 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 N4BP1O75113 896 aaKnown RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 FLOT1O75955 427 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 UQCRHP07919 91 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 MMP10P09238 476 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CCDC175P0C221 793 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 PHKA1P46020 1223 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 ANKRD35Q8N283 1001 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 MYCT1Q8N699 235 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CEP112Q8N8E3 955 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 C2orf69Q8N8R5 385 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 NOC4LQ9BVI4 516 aaKnown RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 CLSTN2Q9H4D0 955 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CCPG1Q9ULG6 757 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 RFX7Q2KHR2 1363 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 ABCC12Q96J65 1359 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 FSD2A1L4K1 749 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 ESPNB1AK53 854 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CYP19A1P11511 503 aaPredicted RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 ALAS1P13196 640 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 SCG2P13521 617 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 MYL5Q02045 173 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 PAK1Q13153 545 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CCDC14Q49A88 953 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 MIS18BP1Q6P0N0 1132 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 TRIM50Q86XT4 487 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 SP8Q8IXZ3 490 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CCDC155Q8N6L0 562 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 FANCBQ8NB91 859 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 DEPTORQ8TB45 409 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 DCAF4Q8WV16 495 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CDHR1Q96JP9 859 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CCDC42Q96M95 316 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 AMNQ9BXJ7 453 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 TSPYL1Q9H0U9 437 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 NUCKS1Q9H1E3 243 aaKnown RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 COMMD10Q9Y6G5 202 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 NEURL4Q96JN8 1562 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CPS1P31327 1500 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 TMEM232C9JQI7 657 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 DDX39AO00148 427 aaKnown RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 KRT5P13647 590 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 TMOD1P28289 359 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 NLRP12P59046 1061 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 KIF5AQ12840 1032 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 ASIC2Q16515 512 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 DCAF17Q5H9S7 520 aaPredicted RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 NAT16Q8N8M0 369 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 SPSB2Q99619 263 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CCDC77Q9BR77 488 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 SRRTQ9BXP5 876 aaKnown RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 AP5M1Q9H0R1 490 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 CSRNP2Q9H175 543 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 ZSWIM6Q9HCJ5 1215 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 SRP68Q9UHB9 627 aaKnown RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 DEPDC5O75140 1603 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 TNKSO95271 1327 aa4.72□□□□□ -1.65
CFTR-201ENST00000003084 FRMPD2Q68DX3 1309 aaPredicted RBP4.72□□□□□ -1.65
CFTR-201ENST00000003084 CYP27B1O15528 508 aa4.71□□□□□ -1.65
CFTR-201ENST00000003084 PRPF6O94906 941 aaKnown RBP4.71□□□□□ -1.65
CFTR-201ENST00000003084 EEF2P13639 858 aaKnown RBP4.71□□□□□ -1.65
CFTR-201ENST00000003084 TNFAIP3P21580 790 aa4.71□□□□□ -1.65
CFTR-201ENST00000003084 COPB2P35606 906 aa4.71□□□□□ -1.65
CFTR-201ENST00000003084 TRAPPC10P48553 1259 aa4.71□□□□□ -1.65
CFTR-201ENST00000003084 SEL1L2Q5TEA6 688 aa4.71□□□□□ -1.65
CFTR-201ENST00000003084 NEK8Q86SG6 692 aa4.71□□□□□ -1.65
CFTR-201ENST00000003084 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.71□□□□□ -1.65
CFTR-201ENST00000003084 TATDN2Q93075 761 aa4.71□□□□□ -1.65
CFTR-201ENST00000003084 DNAJC25Q9H1X3 360 aa4.71□□□□□ -1.65
CFTR-201ENST00000003084 DDX25Q9UHL0 483 aaKnown RBP4.71□□□□□ -1.65
CFTR-201ENST00000003084 TRPC6Q9Y210 931 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms