RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Fam81bA0A140LI28 432 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Rasal2E9PW37 1286 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 ChkaO54804 453 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Stim1P70302 685 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 NxnP97346 435 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Tubb5P99024 444 aaKnown RBP8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 IntuQ059U7 942 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Luc7l3Q5SUF2 432 aaKnown RBP8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 A1cfQ5YD48 595 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 CtcfQ61164 736 aaKnown RBP8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Krt14Q61781 484 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Map10Q8BJS7 891 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Cep85Q8BMK0 761 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Iffo1Q8BXL9 562 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Pex5lQ8C437 567 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Exd1Q8CDF7 570 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 RestQ8VIG1 1082 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Pdxdc1Q99K01 787 aaKnown RBP8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Rufy3Q9D394 469 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 PdclQ9DBX2 301 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Mapk8ip1Q9WVI9 707 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Tcof1O08784 1320 aaKnown RBP8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Rgs12Q8CGE9 1381 aa8.48□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Gm10563F6WIE4 79 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Stx1aO35526 288 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Casp8O89110 480 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Dhx40Q6PE54 779 aaKnown RBP8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Q8C1R3 189 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Q8C6G1 249 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Gucy1a3Q9ERL9 691 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Ecel1Q9JMI0 775 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Cyp11a1Q9QZ82 526 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Mrpl40Q9Z2Q5 206 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Gm6465F7A7Y6 181 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Gm8897L7N294 181 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Gm8906L7N2A2 181 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Ms4a2P20490 235 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 EmbP21995 330 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Map3k7clP58500 142 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Ddr1Q03146 911 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Esyt1Q3U7R1 1092 aaKnown RBP8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Smg7Q5RJH6 1138 aaKnown RBP8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Ddx58Q6Q899 926 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Smim5Q8BT42 78 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Kiaa1524Q8BWY9 907 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Tmem266Q8BZB3 538 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Prr33Q8C494 260 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Sgip1Q8VD37 806 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 PdhbQ9D051 359 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Stx12Q9ER00 274 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Akap8lQ9R0L7 642 aaKnown RBP8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Bcl7cO08664 217 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Dync1i2O88487 612 aaKnown RBP8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Cd19P25918 547 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Epas1P97481 874 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 CcncQ62447 283 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Pof1bQ8K4L4 587 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Gspt1Q8R050 636 aaKnown RBP8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 2310003L06RikQ9CV82 495 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Rab27aQ9ERI2 221 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Uchl5Q9WUP7 329 aa8.47□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Ccdc170D3YXL0 722 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Traf5P70191 558 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Sycp3P70281 254 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 RenbpP82343 430 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Cyb5d1Q5NCY3 228 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Tnfaip3Q60769 775 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Ccdc66Q6NS45 935 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Tsen2Q6P7W5 460 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Zranb1Q7M760 708 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Cfap36Q8C6E0 343 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Pi4k2bQ8CBQ5 469 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Erich5Q8K0S2 362 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 ParnQ8VDG3 624 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Lrrc17Q9CXD9 443 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Edc4Q3UJB9 1406 aaKnown RBP8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Adcy9P51830 1353 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Pkd2l1A2A259 760 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 IkbkgO88522 412 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 PrphP15331 475 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Hoxc10P31257 342 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Rnf19aP50636 840 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Tubb4bP68372 445 aaKnown RBP8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 MpripP97434 1024 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Ppp1r12cQ3UMT1 782 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Phactr4Q501J7 694 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Foxd4Q60688 444 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Prr18Q6PAN7 307 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Olfr1090Q8VGA6 313 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Asb16Q8VHS5 453 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 PyglQ9ET01 850 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Herpud2Q9JJC9 404 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Bcar3Q9QZK2 820 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Gbp2Q9Z0E6 589 aa8.46□□□□□ -1.05
Bdnf-211ENSMUST00000176893 Cdk12Q14AX6 1484 aaKnown RBP8.46□□□□□ -1.06
Bdnf-211ENSMUST00000176893 Gbp6A0A0G2JDV3 611 aa8.46□□□□□ -1.06
Bdnf-211ENSMUST00000176893 Tex13aA2AFS9 377 aa8.46□□□□□ -1.06
Bdnf-211ENSMUST00000176893 Ccdc13D3YV10 709 aa8.46□□□□□ -1.06
Bdnf-211ENSMUST00000176893 Gm43302L7N1X8 611 aa8.46□□□□□ -1.06
Bdnf-211ENSMUST00000176893 Fosl1P48755 273 aa8.46□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms