RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Trdmt1O55055 415 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Pde6aP27664 859 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Pald1P70261 859 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Pou2f2Q00196 463 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Nucb1Q02819 459 aaKnown RBP17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 1700013D24RikQ0P521 120 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 RubcnlQ3TD16 648 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Mdh1bQ5F204 500 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 C2cd5Q7TPS5 1016 aaKnown RBP17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Fbxo10Q7TQF2 950 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Hps6Q8BLY7 805 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Tpcn2Q8BWC0 731 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Vmn1r203Q8R273 311 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gimap7Q8R379 293 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Oxnad1Q8VE38 311 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Usp26Q99MX1 835 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Capn10Q9ESK3 666 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 NfrkbQ6PIJ4 1296 aaKnown RBP17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Pramel7Q810Y8 479 aa17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Cdkn2aipQ8BI72 563 aa17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Armc6Q8BNU0 468 aa17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Jakmip1Q8BVL9 626 aa17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 MslnlQ8C160 685 aa17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Atad2Q8CDM1 1040 aa17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Stard7Q8R1R3 373 aa17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Rbm19Q8R3C6 952 aaKnown RBP17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Rhobtb2Q91V93 728 aa17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Pes1Q9EQ61 584 aaKnown RBP17.93■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Dennd4aE9Q8V6 1869 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Pdzrn4E9PUZ9 1014 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 March10E9PX79 788 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Guca2bO09051 106 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Rbp3P49194 1234 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Tff2Q03404 129 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Neurl1bQ0MW30 546 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 PigsQ6PD26 555 aaKnown RBP17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gpc2Q8BKV1 579 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Pgm5Q8BZF8 567 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Depdc1aQ8CIG0 804 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Atf7Q8R0S1 413 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Ubiad1Q9DC60 336 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Tfap4Q9JIZ5 338 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 PfasQ5SUR0 1337 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Astn1Q61137 1302 aa17.92■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 AW822073A0A0N4SUK1 652 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gm44511A0A0N4SW10 223 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 C87977A2A958 498 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Dnai2A2AC93 623 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 AV320801A2AWL3 467 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gm15023L7MUB4 467 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Klrb1bP27812 223 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Mtx1P47802 317 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Bach1P97302 739 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 NfibP97863 570 aaKnown RBP17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Col19a1Q0VF58 1136 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Eepd1Q3TGW2 569 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Trappc3lQ4KL14 181 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Tmtc2Q56A06 836 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Skiv2lQ6NZR5 1244 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Clca4aQ6Q473 924 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Fbxo11Q7TPD1 930 aaKnown RBP17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Wbp1lQ8BGW2 348 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Fam126bQ8C729 530 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gpr108Q91WD0 569 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Snx29Q9D3S3 818 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Inpp4aQ9EPW0 939 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Scnn1bQ9WU38 638 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Fem1bQ9Z2G0 627 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Suclg2Q9Z2I8 433 aa17.91■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Ces1hD3Z298 562 aa17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 E030030I06RikJ3QML9 246 aa17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Stag2O35638 1231 aa17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Calm1P0DP26 149 aaKnown RBP17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Calm2P0DP27 149 aaKnown RBP17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Calm3P0DP28 149 aaKnown RBP17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Cnga2Q62398 664 aa17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Tshz3Q8CGV9 1081 aa17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Ifi202Q9R002 445 aa17.9■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Sbf2E9PXF8 1872 aa17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Naaladl2A0A0N4SUJ3 795 aa17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Rad51bO35719 350 aa17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Ccdc33Q3ULW6 985 aa17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Gm1587Q3UT80 123 aa17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Znf618Q80YY7 953 aaKnown RBP17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Q8C5S3 137 aa17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Homer1Q9Z2Y3 366 aa17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Cntnap2Q9CPW0 1332 aa17.89■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Fyb2A2A995 729 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Tmem265E9Q8G3 109 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Nfil3O08750 462 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 GnaqP21279 359 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Cep126Q0VBV7 1103 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Limch1Q3UH68 1057 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Armc2Q3URY6 854 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Nsrp1Q5NCR9 542 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Mybpc2Q5XKE0 1136 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Ptger2Q62053 362 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Gm21985Q6P6P5 1106 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Btbd7Q8CFE5 1130 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Lzts2Q91YU6 671 aa17.88■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms