RNA–Protein interactions for RNA: ENSMUST00000118415.1

Hmgb1-ps3-201, mousemouse

BASIC

Gene Hmgb1-ps3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps3-201ENSMUST00000118415 CcinQ8CDE2 588 aa5.52□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 BlmhQ8R016 455 aa5.52□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 NpntQ91V88 561 aa5.52□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Spata17Q9D552 379 aa5.52□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Ifrd2Q9D8U0 441 aa5.52□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Acin1Q9JIX8 1338 aaKnown RBP5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Fmnl2A2APV2 1086 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Tmf1B9EKI3 1091 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Zc3h7bF8VPP8 982 aaKnown RBP5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Usp17ldG5E8G2 545 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Usp17lcG5E8I7 545 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Erdr1J3QMM0 206 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Gm21887J3QQ04 176 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Ap1b1O35643 943 aaKnown RBP5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Capn6O35646 641 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Dok2O70469 412 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Myd88P22366 296 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Csf2rb2P26954 878 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 NcstnP57716 708 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Usp30Q3UN04 517 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Usp7Q6A4J8 1103 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Ppp2r5aQ6PD03 486 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Cyfip1Q7TMB8 1253 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Enox1Q8BHR2 643 aaKnown RBP5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Fam53cQ8BXQ8 393 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Tsr2Q8C8T8 191 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 McmbpQ8R3C0 642 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Sirt2Q8VDQ8 389 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Cbx7Q8VDS3 158 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Ddx1Q91VR5 740 aaKnown RBP5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Sh3d19Q91X43 789 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Ifi44lQ9BDB7 447 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Mrpl49Q9CQ40 166 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Gfod2Q9CYH5 385 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Lonrf3Q9D4H7 753 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 4921524L21RikQ9D5T2 438 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Tnfrsf22Q9ER62 198 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Rtp4Q9ER80 249 aaKnown RBP5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Bace2Q9JL18 514 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Fbxo17Q9QZM8 286 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Knop1Q9Z2Q2 478 aaKnown RBP5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Atad2bE9Q166 1460 aaKnown RBP5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 CftrP26361 1476 aa5.51□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Cttnbp2B9EJA2 1648 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Srpk2O54781 681 aaKnown RBP5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 FshrP35378 692 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Atp11aP98197 1187 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 DtlQ3TLR7 729 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Obox3Q3UT54 335 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 ADGRF3Q58Y75 991 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Zdhhc8Q5Y5T5 762 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Trim37Q6PCX9 961 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Shq1Q7TMX5 569 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Ppfibp1Q8C8U0 969 aaKnown RBP5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Scara5Q8K299 491 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Rtfdc1Q99K95 307 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Scrn1Q9CZC8 414 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Q9D9S1 216 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Vmn1r53Q9EP93 310 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 FastkQ9JIX9 511 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 NagaQ9QWR8 415 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Fbln5Q9WVH9 448 aa5.5□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Ms4a12A0A087WSB9 263 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Gm12248A0A1W2P8B8 313 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 MeiocA2AG06 965 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Usp17lbE9Q9U0 468 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Atp2a2O55143 1044 aaKnown RBP5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Zfp13P10754 512 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Il1rl1P14719 567 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Tgm2P21981 686 aaKnown RBP5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Ybx1P62960 322 aaKnown RBP5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Smad5P97454 465 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Cdca2Q14B71 982 aaKnown RBP5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Gm853Q3UNZ2 425 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Q3UZV7 1028 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Afap1l2Q5DTU0 825 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Lcp1Q61233 627 aaKnown RBP5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Tmem151bQ68FE7 561 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Celf4Q7TSY6 486 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 LppQ8BFW7 613 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Pnma3Q8JZW8 466 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Sde2Q8K1J5 448 aaKnown RBP5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Pls3Q99K51 630 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Pla2g1bQ9Z0Y2 146 aa5.49□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Synj1Q8CHC4 1574 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Zscan4-ps1A0A1C7CYV3 506 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 NpwA0A1L1STR8 176 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 A0A1W2P7S8 802 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Sec14l1A8Y5H7 715 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 TrdnE9Q9K5 693 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Rad51ap2G3UW63 976 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Kbtbd7G5E8C2 690 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 G530012D18RikJ3QK25 139 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Akap1O08715 857 aaKnown RBP5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 RngttO55236 597 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Atxn2O70305 1285 aaKnown RBP5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Slc4a3P16283 1227 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 HexaP29416 528 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Meox1P32442 253 aa5.48□□□□□ -1.53
Hmgb1-ps3-201ENSMUST00000118415 Cdc25cP48967 447 aa5.48□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms