RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Lrfn3Q8BLY3 626 aa14.04□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Defb36Q8K3U4 67 aa14.04□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 HdlbpQ8VDJ3 1268 aaKnown RBP14.04□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Rfc5Q9D0F6 339 aa14.04□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Taf7Q9R1C0 341 aa14.04□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 AtmQ62388 3066 aa14.04□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Lgr6Q3UVD5 967 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Ttc9Q3V038 219 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 EndouQ3V188 412 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Gm14851Q5ERJ0 116 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Zfp90Q61967 636 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Cep70Q6IQY5 616 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Slc45a1Q8BIV7 751 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Usp20Q8C6M1 916 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Slc14a2Q8R4T9 930 aa14.03□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Plxna3P70208 1872 aa14.02□□□□□ -0.16
Hmgb1-202ENSMUST00000093196 Parp3Q3ULW8 533 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Ppp1r12cQ3UMT1 782 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Clca4aQ6Q473 924 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Kcnt1Q6ZPR4 1224 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Map3k11Q80XI6 850 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Phf20Q8BLG0 1010 aaKnown RBP14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Slc39a11Q8BWY7 342 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Dtwd2Q9D0U1 298 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Tmod2Q9JKK7 351 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Trip4Q9QXN3 581 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 CorinQ9Z319 1113 aa14.02□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Ank1Q02357 1862 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Rtf1A2AQ19 715 aaKnown RBP14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 AV320801A2AWL3 467 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Gm13119B1ARV5 481 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Phactr2B1AVP0 632 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Cald1E9QA15 768 aaKnown RBP14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Gm15023L7MUB4 467 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Cops6O88545 324 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Cobll1Q3UMF0 1273 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Tbc1d1Q60949 1255 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Pwp2Q8BU03 919 aaKnown RBP14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Bud13Q8R149 637 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Gadd45gip1Q9CR59 222 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Tmx2Q9D710 295 aaKnown RBP14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Ftsj3Q9DBE9 838 aaKnown RBP14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Gipc1Q9Z0G0 333 aa14.01□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Sall1Q9ER74 1322 aa14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 TaglnP37804 201 aaKnown RBP14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Eif4a1P60843 406 aaKnown RBP14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Cep126Q0VBV7 1103 aa14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Zbtb39Q6PDK0 712 aa14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Foxe1Q8R2I0 371 aa14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Pcdhb11Q91UZ8 797 aa14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 CutaQ9CQ89 177 aa14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Dusp13Q9QYJ7 198 aa14□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Zscan4-ps1A0A1C7CYV3 506 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Hsp90aa1P07901 733 aaKnown RBP13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 NefhP19246 1090 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Mmp20P57748 482 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Spata18Q0P557 537 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Ccdc51Q3URS9 406 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Rnf14Q9JI90 485 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Gyg1Q9R062 333 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Tnrc18Q80WC3 2878 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 1110002E22RikE0CYV9 1786 aa13.99□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Alx3O70137 343 aa13.98□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 LtkP08923 888 aa13.98□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Osbpl2Q8BX94 484 aa13.98□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Gpr153Q8K0Z9 631 aa13.98□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 GraspQ9JJA9 392 aa13.98□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Top3bQ9Z321 862 aaKnown RBP13.98□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Plekhh1Q80TI1 1356 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 DmdP11531 3678 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Kcnb2A6H8H5 907 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Clrn2B2RVW2 232 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Srsf11E9Q6E5 511 aaKnown RBP13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 AvpP35455 168 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Npr3P70180 536 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Gabpb2P81069 414 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 IntuQ059U7 942 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Cyp2c29Q64458 490 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 GmipQ6PGG2 971 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Srek1Q8BZX4 494 aaKnown RBP13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Rab30Q923S9 203 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Rbm33Q9CXK9 1231 aaKnown RBP13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 DmgdhQ9DBT9 869 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Fkbp1bQ9Z2I2 108 aa13.97□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 FlnbQ80X90 2602 aaKnown RBP13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Greb1lB9EJV3 1913 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Baz2bA2AUY4 2123 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Irgm2A0A140LIF8 407 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Cyp2d12Q8BVD2 504 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Ppp1r11Q8K1L5 131 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Tut1Q8R3F9 869 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Slc44a4Q91VA1 707 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Snx11Q91WL6 271 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 Gsdmdc1Q9D8T2 487 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 P2rx7Q9Z1M0 595 aa13.96□□□□□ -0.17
Hmgb1-202ENSMUST00000093196 4931408C20RikE9PWP9 1381 aa13.96□□□□□ -0.18
Hmgb1-202ENSMUST00000093196 Arid4aF8VPQ2 1261 aaKnown RBP13.95□□□□□ -0.18
Hmgb1-202ENSMUST00000093196 Irs1P35569 1233 aa13.95□□□□□ -0.18
Hmgb1-202ENSMUST00000093196 Fmr1P35922 614 aaKnown RBP13.95□□□□□ -0.18
Hmgb1-202ENSMUST00000093196 Il15P48346 162 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms