RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Cul3Q9JLV5 768 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Ccdc62E9PVD1 701 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 OtulinQ3UCV8 352 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Dzip3Q7TPV2 1204 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Tlk1Q8C0V0 766 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 CutaQ9CQ89 177 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Galnt15Q9D2N8 638 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Lrp2bpQ9D4C6 346 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Glg1Q61543 1175 aaKnown RBP8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Pfkfb1P70266 471 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Tmem132eQ6IEE6 982 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 E330017A01RikQ8BU47 192 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Kif9Q9WV04 790 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Tom1l1Q923U0 474 aa8.9□□□□□ -0.98
Spen-201ENSMUST00000078886 Lrrc36Q3V0M2 755 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 PicalmQ7M6Y3 660 aaKnown RBP8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Pcdha7Q91Y13 937 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Zscan12Q9Z1D7 501 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Nhej1Q3KNJ2 295 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Klhl31Q8BWA5 634 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Zyg11aA2BFL2 627 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 CopeO89079 308 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Lmnb2P21619 596 aaKnown RBP8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Prpf38aQ4FK66 312 aaKnown RBP8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 RasefQ5RI75 627 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 CtcfQ61164 736 aaKnown RBP8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Ccdc85bQ6PDY0 202 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Sde2Q8K1J5 448 aaKnown RBP8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Tpcn1Q9EQJ0 817 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Dctn3Q9Z0Y1 186 aa8.9□□□□□ -0.99
Spen-201ENSMUST00000078886 Gm44G3UW88 330 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Mybl2P48972 704 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Sash1P59808 1230 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Slc7a6osQ7TPE5 306 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Sestd1Q80UK0 696 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Atg16l1Q8C0J2 607 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Eif4a2P10630 407 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Actn4P57780 912 aaKnown RBP8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Sh3gl1Q62419 368 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 SynmQ70IV5 1561 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Mlh3A0A1Y7VMP7 1443 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Nr1d1Q3UV55 615 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Rab3ipQ68EF0 428 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Rccd1Q8BTU7 377 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Trim60Q8VI40 466 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Chchd6Q91VN4 273 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 EhhadhQ9DBM2 718 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Tbc1d9bQ5SVR0 1263 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Anapc4Q91W96 807 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Irs4Q9Z0Y7 1216 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Trim12cD3Z3L3 497 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Prl7a2O54831 253 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Bola2Q8BGS2 86 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 CenpuQ8C4M7 410 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 ParnQ8VDG3 624 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Trpc5Q9QX29 975 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Camsap1A2AHC3 1581 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Cyp2j7A0A140T8U1 504 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Psmc2P46471 433 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Spdl1Q923A2 608 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Rapgef6Q5NCJ1 1609 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Atg4a-psA0A0G2JFS9 396 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Nxf2Q4ZGD8 691 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Nfe2l2Q60795 597 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Ccdc154Q6RUT8 657 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Prune1Q8BIW1 454 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Atg4aQ8C9S8 396 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Kcnj14Q8JZN3 434 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Prl3d3A0A0M6L0J6 224 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Ttll7A4Q9F0 912 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Tmtc1Q3UV71 942 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Naa30Q8CES0 364 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Gimap7Q8R379 293 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Arhgap29Q8CGF1 1266 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Serpinb10Q8K1K6 397 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Ero1aQ8R180 464 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Dnajc3Q91YW3 504 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Cabp7Q91ZM8 215 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Lzts3A2AHG0 700 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Akr1b10G5E895 316 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Cacna2d1O08532 1103 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 TsksO54887 585 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Ppp4r4Q8C0Y0 875 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Cst12Q9DAN8 128 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Abcb6Q9DC29 842 aa8.89□□□□□ -0.99
Spen-201ENSMUST00000078886 Slc12a1P55014 1095 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 FtoQ8BGW1 502 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Snx5Q9D8U8 404 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Sult6b1P0CC03 303 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Hif1aQ61221 836 aaKnown RBP8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Me3Q8BMF3 604 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 NemfQ8CCP0 1064 aaKnown RBP8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Lzts2Q91YU6 671 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Copg1Q9QZE5 874 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 PtprkP35822 1457 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Stmn3O70166 180 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Arhgap17Q3UIA2 846 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Afg3l1Q920A7 789 aaKnown RBP8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Kif21bQ9QXL1 1668 aa8.88□□□□□ -0.99
Spen-201ENSMUST00000078886 Snrpa1P57784 255 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms