RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Map3k11Q80XI6 850 aa13.18□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Hook3Q8BUK6 718 aa13.18□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Sf3b3Q921M3 1217 aaKnown RBP13.18□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ubxn1Q922Y1 297 aa13.18□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ccdc121E9Q6D3 323 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 LdhbP16125 334 aaKnown RBP13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Krt14Q61781 484 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 CrkQ64010 304 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Phf23Q8BSN5 401 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Csgalnact2Q8C1F4 542 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Med10Q9CXU0 135 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 AacsQ9D2R0 672 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 TxlnaQ6PAM1 554 aaKnown RBP13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Tspyl4Q8VD63 406 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Slc44a4Q91VA1 707 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Cetn2Q9R1K9 172 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 1700003F12RikA2AKE5 210 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Pus7B7ZNL8 666 aaKnown RBP13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 ErmardE9Q048 622 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Gna15P30678 374 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Naa15Q80UM3 865 aaKnown RBP13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ptrh1Q8BW00 204 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Arl8aQ8VEH3 186 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Synpo2Q91YE8 1087 aaKnown RBP13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 4921524L21RikQ9D5T2 438 aa13.17□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Akap2O54931 893 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 DSCC1Q14AI0 399 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Q3TYL0 343 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 RalylQ8BTF8 293 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Klhl20Q8VCK5 604 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ubxn8Q9QZ49 277 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Idh1O88844 414 aaKnown RBP13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 P4hbP09103 509 aaKnown RBP13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Nr5a1P33242 462 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Lig3P97386 1015 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Psd3Q2PFD7 1037 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Tax1bp1Q3UKC1 814 aaKnown RBP13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Tmem59lQ7TNI2 337 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Galnt17Q7TT15 598 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Osbpl2Q8BX94 484 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Dnm3Q8BZ98 863 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 WaslQ91YD9 501 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Snrnp35Q9D384 244 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Armc3A2AU72 881 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Hps5P59438 1126 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ddx19bQ8BZY3 494 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Lin9Q8C735 542 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Atp1a1Q8VDN2 1023 aaKnown RBP13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Asic2Q925H0 512 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Golga5Q9QYE6 729 aa13.16□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Mnat1P51949 309 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ripply1Q2WG77 201 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Acot10Q32MW3 439 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Bbof1Q3V079 533 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 HarsQ61035 509 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Mei4Q8BRM6 389 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 NkapQ9D0F4 415 aaKnown RBP13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Etnk1Q9D4V0 363 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Zcchc17Q9ESX4 241 aaKnown RBP13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ercc4Q9QZD4 917 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Llgl2Q3TJ91 1027 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ttbk2Q3UVR3 1243 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Prr7Q3V0I2 269 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Fbxo41Q6NS60 873 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Sdccag8Q80UF4 717 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ppp2r2cQ8BG02 447 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Tor4aQ8BH02 426 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 AsphQ8BSY0 741 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Tmod4Q9JLH8 345 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Fkbp1aP26883 108 aaKnown RBP13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Aimp1P31230 310 aaKnown RBP13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Nap1l4Q78ZA7 375 aaKnown RBP13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Slc7a6osQ7TPE5 306 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Ddx39aQ8VDW0 427 aaKnown RBP13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 MbipQ99LQ1 341 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 NapgQ9CWZ7 312 aa13.15□□□□□ -0.3
Shtn1-201ENSMUST00000047511 Capn2O08529 700 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Actn3O88990 900 aaKnown RBP13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Cetn1P41209 172 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Sfi1Q3UZY0 1216 aaKnown RBP13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Stxbp3Q60770 592 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Etf1Q8BWY3 437 aaKnown RBP13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 SowahdQ8BY98 327 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Yipf1Q91VU1 306 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Mfap3Q922T2 349 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Trim59Q922Y2 403 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 TbcbQ9D1E6 244 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Copb1Q9JIF7 953 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Znf541Q0GGX2 1363 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Pramel3A2AHA7 463 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Gm7903A2AWL1 463 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 AV320801A2AWL3 467 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Gm15023L7MUB4 467 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Grin1P35438 938 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 XpcP51612 930 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 1810065E05RikQ5NC41 235 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 LarsQ8BMJ2 1178 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Dnajc14Q921R4 703 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Tsnaxip1Q99P25 704 aa13.14□□□□□ -0.31
Shtn1-201ENSMUST00000047511 Atp1a4Q9WV27 1032 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms