RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 SLX4Q12098 748 aa0.78□□□□□ -2.28
snR48snR48 RBD2Q12270 262 aa0.78□□□□□ -2.28
snR48snR48 SUL2Q12325 893 aa0.78□□□□□ -2.28
snR48snR48 SNF3P10870 884 aa0.77□□□□□ -2.29
snR48snR48 GAC1P28006 793 aa0.77□□□□□ -2.29
snR48snR48 SAC6P32599 642 aaKnown RBP0.77□□□□□ -2.29
snR48snR48 MIA40P36046 403 aa0.77□□□□□ -2.29
snR48snR48 BMT2P38278 337 aa0.77□□□□□ -2.29
snR48snR48 YJR142WP47173 342 aa0.77□□□□□ -2.29
snR48snR48 MSO1P53604 210 aaKnown RBP0.77□□□□□ -2.29
snR48snR48 RSM28Q03430 361 aa0.77□□□□□ -2.29
snR48snR48 ATG26Q06321 1198 aa0.77□□□□□ -2.29
snR48snR48 ENT4Q07872 247 aa0.77□□□□□ -2.29
snR48snR48 SWT1Q12104 458 aa0.77□□□□□ -2.29
snR48snR48 TMS1Q12116 473 aa0.77□□□□□ -2.29
snR48snR48 YGR161W-CQ3E744 92 aa0.77□□□□□ -2.29
snR48snR48 CAR1P00812 333 aaKnown RBP0.76□□□□□ -2.29
snR48snR48 HHF1P02309 103 aaKnown RBP0.76□□□□□ -2.29
snR48snR48 ADE3P07245 946 aaKnown RBP0.76□□□□□ -2.29
snR48snR48 CPR1P14832 162 aaKnown RBP0.76□□□□□ -2.29
snR48snR48 RIT1P23796 513 aa0.76□□□□□ -2.29
snR48snR48 LCB1P25045 558 aaKnown RBP0.76□□□□□ -2.29
snR48snR48 RVS161P25343 265 aaKnown RBP0.76□□□□□ -2.29
snR48snR48 SGF29P25554 259 aa0.76□□□□□ -2.29
snR48snR48 CMK1P27466 446 aaKnown RBP0.76□□□□□ -2.29
snR48snR48 CBF2P32504 956 aa0.76□□□□□ -2.29
snR48snR48 HCS1P34243 683 aa0.76□□□□□ -2.29
snR48snR48 MID2P36027 376 aa0.76□□□□□ -2.29
snR48snR48 NTR2P36118 322 aaPredicted RBP0.76□□□□□ -2.29
snR48snR48 MRP21P38175 177 aa0.76□□□□□ -2.29
snR48snR48 VPS52P39904 641 aa0.76□□□□□ -2.29
snR48snR48 SHY1P53266 389 aa0.76□□□□□ -2.29
snR48snR48 ELP3Q02908 557 aaKnown RBP0.76□□□□□ -2.29
snR48snR48 PHM6Q05637 104 aa0.76□□□□□ -2.29
snR48snR48 PBA1Q05778 276 aa0.76□□□□□ -2.29
snR48snR48 ADH2P00331 348 aaKnown RBP0.75□□□□□ -2.29
snR48snR48 ATR1P13090 542 aa0.75□□□□□ -2.29
snR48snR48 FRD1P32614 470 aaKnown RBP0.75□□□□□ -2.29
snR48snR48 YKL097CP34245 136 aa0.75□□□□□ -2.29
snR48snR48 ESL2P36168 1195 aa0.75□□□□□ -2.29
snR48snR48 AAP1P37898 856 aaKnown RBP0.75□□□□□ -2.29
snR48snR48 ROT2P38138 954 aa0.75□□□□□ -2.29
snR48snR48 SHO1P40073 367 aa0.75□□□□□ -2.29
snR48snR48 YIL161WP40449 235 aaKnown RBP0.75□□□□□ -2.29
snR48snR48 YIL067CP40514 678 aa0.75□□□□□ -2.29
snR48snR48 YFL067WP43537 175 aa0.75□□□□□ -2.29
snR48snR48 PUS4P48567 403 aaKnown RBP0.75□□□□□ -2.29
snR48snR48 RLI1Q03195 608 aaKnown RBP0.75□□□□□ -2.29
snR48snR48 DIC1Q06143 298 aa0.75□□□□□ -2.29
snR48snR48 THI20Q08224 551 aa0.75□□□□□ -2.29
snR48snR48 MCM3P24279 971 aaKnown RBP0.74□□□□□ -2.29
snR48snR48 SWI4P25302 1093 aaKnown RBP0.74□□□□□ -2.29
snR48snR48 YCR022CP25620 114 aa0.74□□□□□ -2.29
snR48snR48 SNC1P31109 117 aa0.74□□□□□ -2.29
snR48snR48 TFC4P33339 1025 aa0.74□□□□□ -2.29
snR48snR48 ANS1P38832 159 aa0.74□□□□□ -2.29
snR48snR48 ALG8P40351 577 aa0.74□□□□□ -2.29
snR48snR48 SWP82P43554 623 aa0.74□□□□□ -2.29
snR48snR48 MAD3P47074 515 aa0.74□□□□□ -2.29
snR48snR48 CIA1Q05583 330 aa0.74□□□□□ -2.29
snR48snR48 GLO2Q05584 274 aa0.74□□□□□ -2.29
snR48snR48 ADE13Q05911 482 aaKnown RBP0.74□□□□□ -2.29
snR48snR48 SUP35P05453 685 aaKnown RBP0.73□□□□□ -2.29
snR48snR48 ARP2P32381 391 aaKnown RBP0.73□□□□□ -2.29
snR48snR48 MRP4P32902 394 aa0.73□□□□□ -2.29
snR48snR48 STT3P39007 718 aaKnown RBP0.73□□□□□ -2.29
snR48snR48 YMR027WQ04371 470 aa0.73□□□□□ -2.29
snR48snR48 RRN11Q04712 507 aa0.73□□□□□ -2.29
snR48snR48 APL4Q12028 832 aa0.73□□□□□ -2.29
snR48snR48 YPS3Q12303 508 aa0.73□□□□□ -2.29
snR48snR48 ATP2P00830 511 aaKnown RBP0.72□□□□□ -2.29
snR48snR48 BIK1P11709 440 aa0.72□□□□□ -2.29
snR48snR48 SIR1P21691 654 aa0.72□□□□□ -2.29
snR48snR48 PUT3P25502 979 aaPredicted RBP0.72□□□□□ -2.29
snR48snR48 YBR071WP38243 211 aa0.72□□□□□ -2.29
snR48snR48 ARP1P38696 384 aa0.72□□□□□ -2.29
snR48snR48 ERR3P42222 437 aa0.72□□□□□ -2.29
snR48snR48 YPL014WQ02606 381 aa0.72□□□□□ -2.29
snR48snR48 MRPL35Q06678 367 aa0.72□□□□□ -2.29
snR48snR48 ERV2Q12284 196 aa0.72□□□□□ -2.29
snR48snR48 YTA7P40340 1379 aa0.71□□□□□ -2.3
snR48snR48 PGS1P25578 521 aa0.71□□□□□ -2.3
snR48snR48 ARO2P28777 376 aaKnown RBP0.71□□□□□ -2.3
snR48snR48 NUP120P35729 1037 aa0.71□□□□□ -2.3
snR48snR48 LAG1P38703 411 aa0.71□□□□□ -2.3
snR48snR48 OSH3P38713 996 aaKnown RBP0.71□□□□□ -2.3
snR48snR48 UBA4P38820 440 aa0.71□□□□□ -2.3
snR48snR48 CSM2P40465 213 aa0.71□□□□□ -2.3
snR48snR48 CTF18P49956 741 aa0.71□□□□□ -2.3
snR48snR48 STR3P53101 465 aaKnown RBP0.71□□□□□ -2.3
snR48snR48 YMR160WQ03823 816 aa0.71□□□□□ -2.3
snR48snR48 IWR1Q07532 353 aaPredicted RBP0.71□□□□□ -2.3
snR48snR48 ARP7Q12406 477 aa0.71□□□□□ -2.3
snR48snR48 CTF3Q12748 733 aa0.71□□□□□ -2.3
snR48snR48 HXK2P04807 486 aaKnown RBP0.7□□□□□ -2.3
snR48snR48 APE1P14904 514 aa0.7□□□□□ -2.3
snR48snR48 SPO16P17122 198 aa0.7□□□□□ -2.3
snR48snR48 SMC3P47037 1230 aa0.7□□□□□ -2.3
snR48snR48 YJR120WP47157 116 aa0.7□□□□□ -2.3
snR48snR48 IST1P53843 298 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 182.4 ms