RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C ZRG17P53735 605 aa9.42□□□□□ -0.9
SPT20YOL148C UGO1Q03327 502 aa9.42□□□□□ -0.9
SPT20YOL148C DCS1Q06151 350 aa9.42□□□□□ -0.9
SPT20YOL148C TPO1Q07824 586 aa9.42□□□□□ -0.9
SPT20YOL148C HOS1Q12214 470 aa9.42□□□□□ -0.9
SPT20YOL148C PUP3P25451 205 aaKnown RBP9.41□□□□□ -0.9
SPT20YOL148C PPZ1P26570 692 aa9.41□□□□□ -0.9
SPT20YOL148C PRR1P28708 518 aa9.41□□□□□ -0.9
SPT20YOL148C IMP3P32899 183 aaPredicted RBP9.41□□□□□ -0.9
SPT20YOL148C YHR182WP38870 785 aa9.41□□□□□ -0.9
SPT20YOL148C YHR219WP38900 624 aa9.41□□□□□ -0.9
SPT20YOL148C FAD1P38913 306 aa9.41□□□□□ -0.9
SPT20YOL148C SEC28P40509 296 aaKnown RBP9.41□□□□□ -0.9
SPT20YOL148C YGR210CP42942 411 aa9.41□□□□□ -0.9
SPT20YOL148C YJL132WP47014 750 aa9.41□□□□□ -0.9
SPT20YOL148C IML2P47031 731 aa9.41□□□□□ -0.9
SPT20YOL148C RIM21P48565 533 aa9.41□□□□□ -0.9
SPT20YOL148C MET13P53128 600 aa9.41□□□□□ -0.9
SPT20YOL148C SOL4P53315 255 aa9.41□□□□□ -0.9
SPT20YOL148C RTT102P53330 157 aa9.41□□□□□ -0.9
SPT20YOL148C APP1P53933 587 aa9.41□□□□□ -0.9
SPT20YOL148C LSM3P57743 89 aaKnown RBP9.41□□□□□ -0.9
SPT20YOL148C ELP3Q02908 557 aaKnown RBP9.41□□□□□ -0.9
SPT20YOL148C PPN1Q04119 674 aa9.41□□□□□ -0.9
SPT20YOL148C HPT1Q04178 221 aaKnown RBP9.41□□□□□ -0.9
SPT20YOL148C NEJ1Q06148 342 aa9.41□□□□□ -0.9
SPT20YOL148C THI21Q08975 551 aa9.41□□□□□ -0.9
SPT20YOL148C RAD59Q12223 238 aa9.41□□□□□ -0.9
SPT20YOL148C YDR061WQ12298 539 aa9.41□□□□□ -0.9
SPT20YOL148C PFK27Q12471 397 aaPredicted RBP9.41□□□□□ -0.9
SPT20YOL148C MHF1Q3E835 90 aa9.41□□□□□ -0.9
SPT20YOL148C SAS5Q99314 248 aa9.41□□□□□ -0.9
SPT20YOL148C THP2O13539 261 aaKnown RBP9.4□□□□□ -0.9
SPT20YOL148C ENA1P13587 1091 aa9.4□□□□□ -0.9
SPT20YOL148C GCD11P32481 527 aaKnown RBP9.4□□□□□ -0.9
SPT20YOL148C PPQ1P32945 549 aa9.4□□□□□ -0.9
SPT20YOL148C ARA1P38115 344 aa9.4□□□□□ -0.9
SPT20YOL148C IPT1P38954 527 aa9.4□□□□□ -0.9
SPT20YOL148C MNN9P39107 395 aaKnown RBP9.4□□□□□ -0.9
SPT20YOL148C VHR2P40041 505 aa9.4□□□□□ -0.9
SPT20YOL148C ENA2Q01896 1091 aa9.4□□□□□ -0.9
SPT20YOL148C HEH2Q03281 663 aa9.4□□□□□ -0.9
SPT20YOL148C YPS7Q06325 596 aa9.4□□□□□ -0.9
SPT20YOL148C ECM30Q06673 1274 aa9.4□□□□□ -0.9
SPT20YOL148C FMP25Q08023 583 aa9.4□□□□□ -0.9
SPT20YOL148C HFI1Q12060 488 aa9.4□□□□□ -0.9
SPT20YOL148C ENA5Q12691 1091 aa9.4□□□□□ -0.9
SPT20YOL148C YAP1P19880 650 aaKnown RBP9.4□□□□□ -0.91
SPT20YOL148C DIT1P21623 536 aa9.4□□□□□ -0.91
SPT20YOL148C RPL24BP24000 155 aaKnown RBP9.4□□□□□ -0.91
SPT20YOL148C FRE1P32791 686 aa9.4□□□□□ -0.91
SPT20YOL148C TAF14P35189 244 aa9.4□□□□□ -0.91
SPT20YOL148C ROT2P38138 954 aa9.4□□□□□ -0.91
SPT20YOL148C GPX2P38143 162 aa9.4□□□□□ -0.91
SPT20YOL148C RIM11P38615 370 aa9.4□□□□□ -0.91
SPT20YOL148C ARN2P38724 620 aa9.4□□□□□ -0.91
SPT20YOL148C IPI1P38803 334 aaPredicted RBP9.4□□□□□ -0.91
SPT20YOL148C SOP4P39543 234 aaPredicted RBP9.4□□□□□ -0.91
SPT20YOL148C TPA1P40032 644 aaKnown RBP9.4□□□□□ -0.91
SPT20YOL148C ALD5P40047 520 aaKnown RBP9.4□□□□□ -0.91
SPT20YOL148C BST1P43571 1029 aa9.4□□□□□ -0.91
SPT20YOL148C RKM2Q03942 479 aa9.4□□□□□ -0.91
SPT20YOL148C BCH1Q05029 724 aa9.4□□□□□ -0.91
SPT20YOL148C ECM38Q05902 660 aaPredicted RBP9.4□□□□□ -0.91
SPT20YOL148C SAM4Q08985 325 aaKnown RBP9.4□□□□□ -0.91
SPT20YOL148C OSW2Q12202 724 aa9.4□□□□□ -0.91
SPT20YOL148C YPR1Q12458 312 aa9.4□□□□□ -0.91
SPT20YOL148C NDI1P32340 513 aa9.39□□□□□ -0.91
SPT20YOL148C MRS6P32864 603 aaKnown RBP9.39□□□□□ -0.91
SPT20YOL148C SSO1P32867 290 aa9.39□□□□□ -0.91
SPT20YOL148C YKL100CP34248 587 aa9.39□□□□□ -0.91
SPT20YOL148C YBR225WP38321 900 aa9.39□□□□□ -0.91
SPT20YOL148C SRP72P38688 640 aaKnown RBP9.39□□□□□ -0.91
SPT20YOL148C KEL1P38853 1164 aaKnown RBP9.39□□□□□ -0.91
SPT20YOL148C UTP18P40362 594 aaPredicted RBP9.39□□□□□ -0.91
SPT20YOL148C SCD6P45978 349 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
SPT20YOL148C YGL036WP53185 909 aaPredicted RBP9.39□□□□□ -0.91
SPT20YOL148C CPR8P53728 308 aa9.39□□□□□ -0.91
SPT20YOL148C IPI3P53877 555 aa9.39□□□□□ -0.91
SPT20YOL148C PFA5Q03289 374 aa9.39□□□□□ -0.91
SPT20YOL148C YLR326WQ06170 240 aaKnown RBP9.39□□□□□ -0.91
SPT20YOL148C GPI11Q06636 219 aa9.39□□□□□ -0.91
SPT20YOL148C COS7Q07788 383 aa9.39□□□□□ -0.91
SPT20YOL148C TRP3P00937 484 aa9.38□□□□□ -0.91
SPT20YOL148C URA3P03962 267 aa9.38□□□□□ -0.91
SPT20YOL148C PHO4P07270 312 aaKnown RBP9.38□□□□□ -0.91
SPT20YOL148C YPK1P12688 680 aaKnown RBP9.38□□□□□ -0.91
SPT20YOL148C ACO1P19414 778 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
SPT20YOL148C COQ8P27697 501 aa9.38□□□□□ -0.91
SPT20YOL148C YRO2P38079 344 aa9.38□□□□□ -0.91
SPT20YOL148C YHK8P38776 514 aa9.38□□□□□ -0.91
SPT20YOL148C DDI1P40087 428 aa9.38□□□□□ -0.91
SPT20YOL148C PHB1P40961 287 aa9.38□□□□□ -0.91
SPT20YOL148C SER2P42941 309 aa9.38□□□□□ -0.91
SPT20YOL148C MPS3P47069 682 aa9.38□□□□□ -0.91
SPT20YOL148C SPR6Q01684 191 aa9.38□□□□□ -0.91
SPT20YOL148C RSM28Q03430 361 aa9.38□□□□□ -0.91
SPT20YOL148C EMG1Q06287 252 aaKnown RBP9.38□□□□□ -0.91
SPT20YOL148C UBR2Q07963 1872 aa9.38□□□□□ -0.91
SPT20YOL148C IES4Q08561 116 aa9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms