RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C ADE12P80210 433 aaKnown RBP9.99□□□□□ -0.81
YSR3YKR053C MDM35O60200 86 aa9.98□□□□□ -0.81
YSR3YKR053C GAL4P04386 881 aa9.98□□□□□ -0.81
YSR3YKR053C MRPL25P23369 157 aa9.98□□□□□ -0.81
YSR3YKR053C RSC6P25632 483 aa9.98□□□□□ -0.81
YSR3YKR053C CWP1P28319 239 aa9.98□□□□□ -0.81
YSR3YKR053C HRR25P29295 494 aaKnown RBP9.98□□□□□ -0.81
YSR3YKR053C SFP1P32432 683 aa9.98□□□□□ -0.81
YSR3YKR053C NFU1P32860 256 aa9.98□□□□□ -0.81
YSR3YKR053C THI80P35202 319 aa9.98□□□□□ -0.81
YSR3YKR053C CEP3P40969 608 aa9.98□□□□□ -0.81
YSR3YKR053C RSC3Q06639 885 aa9.98□□□□□ -0.81
YSR3YKR053C CEM1P39525 442 aa9.97□□□□□ -0.81
YSR3YKR053C GIM4P40005 111 aaKnown RBP9.97□□□□□ -0.81
YSR3YKR053C MEP1P40260 492 aa9.97□□□□□ -0.81
YSR3YKR053C BUD32P53323 261 aa9.97□□□□□ -0.81
YSR3YKR053C SSL1Q04673 461 aaPredicted RBP9.97□□□□□ -0.81
YSR3YKR053C FRA1Q07825 749 aa9.97□□□□□ -0.81
YSR3YKR053C PFA4Q12006 378 aa9.97□□□□□ -0.81
YSR3YKR053C YDR061WQ12298 539 aa9.97□□□□□ -0.81
YSR3YKR053C ICT1Q12385 394 aa9.97□□□□□ -0.81
YSR3YKR053C SKM1Q12469 655 aa9.97□□□□□ -0.81
YSR3YKR053C HSH49Q99181 213 aaPredicted RBP9.97□□□□□ -0.81
YSR3YKR053C ETR1P38071 380 aa9.96□□□□□ -0.82
YSR3YKR053C ARA1P38115 344 aa9.96□□□□□ -0.82
YSR3YKR053C YBR238CP38330 731 aaKnown RBP9.96□□□□□ -0.82
YSR3YKR053C YHR045WP38775 560 aa9.96□□□□□ -0.82
YSR3YKR053C UBA4P38820 440 aa9.96□□□□□ -0.82
YSR3YKR053C GAT1P43574 510 aa9.96□□□□□ -0.82
YSR3YKR053C RHO3Q00245 231 aaKnown RBP9.96□□□□□ -0.82
YSR3YKR053C ECM9Q02202 377 aa9.96□□□□□ -0.82
YSR3YKR053C ROT1Q03691 256 aa9.96□□□□□ -0.82
YSR3YKR053C MRH1Q12117 320 aaPredicted RBP9.96□□□□□ -0.82
YSR3YKR053C FUM1P08417 488 aaKnown RBP9.95□□□□□ -0.82
YSR3YKR053C YAR066WP0CX18 203 aa9.95□□□□□ -0.82
YSR3YKR053C YHR214WP0CX19 203 aa9.95□□□□□ -0.82
YSR3YKR053C AMD2P22580 549 aa9.95□□□□□ -0.82
YSR3YKR053C TRX2P22803 104 aaKnown RBP9.95□□□□□ -0.82
YSR3YKR053C RNQ1P25367 405 aa9.95□□□□□ -0.82
YSR3YKR053C GCD11P32481 527 aaKnown RBP9.95□□□□□ -0.82
YSR3YKR053C WBP1P33767 430 aaKnown RBP9.95□□□□□ -0.82
YSR3YKR053C MPT5P39016 859 aaKnown RBP RIP-Chip data9.95□□□□□ -0.82not detected
YSR3YKR053C YER158CP40095 573 aa9.95□□□□□ -0.82
YSR3YKR053C SMX2P40204 77 aaKnown RBP9.95□□□□□ -0.82
YSR3YKR053C MIC19P43594 170 aa9.95□□□□□ -0.82
YSR3YKR053C TY4A-JP47023 414 aa9.95□□□□□ -0.82
YSR3YKR053C ZIP2P53061 704 aa9.95□□□□□ -0.82
YSR3YKR053C RTS3P53289 263 aa9.95□□□□□ -0.82
YSR3YKR053C HOS3Q02959 697 aaKnown RBP9.95□□□□□ -0.82
YSR3YKR053C KCS1Q12494 1050 aa9.95□□□□□ -0.82
YSR3YKR053C PHO5P00635 467 aa9.94□□□□□ -0.82
YSR3YKR053C CUP1-1P0CX80 61 aa9.94□□□□□ -0.82
YSR3YKR053C CUP1-2P0CX81 61 aa9.94□□□□□ -0.82
YSR3YKR053C ATP11P32453 318 aa9.94□□□□□ -0.82
YSR3YKR053C CDC13P32797 924 aaKnown RBP9.94□□□□□ -0.82
YSR3YKR053C CYM1P32898 989 aa9.94□□□□□ -0.82
YSR3YKR053C NTR2P36118 322 aaPredicted RBP9.94□□□□□ -0.82
YSR3YKR053C CCT2P39076 527 aaKnown RBP9.94□□□□□ -0.82
YSR3YKR053C SSP120P39931 234 aaKnown RBP9.94□□□□□ -0.82
YSR3YKR053C UTP18P40362 594 aaPredicted RBP9.94□□□□□ -0.82
YSR3YKR053C BOL2P53082 120 aa9.94□□□□□ -0.82
YSR3YKR053C LSC1P53598 329 aaKnown RBP9.94□□□□□ -0.82
YSR3YKR053C YLR177WQ06251 628 aa9.94□□□□□ -0.82
YSR3YKR053C YET3Q07451 203 aa9.94□□□□□ -0.82
YSR3YKR053C MCD1Q12158 566 aa9.94□□□□□ -0.82
YSR3YKR053C CMR1Q12510 522 aaKnown RBP9.94□□□□□ -0.82
YSR3YKR053C GCY1P14065 312 aaKnown RBP RIP-Chip data9.93□□□□□ -0.82not detected
YSR3YKR053C SEC14P24280 304 aaKnown RBP9.93□□□□□ -0.82
YSR3YKR053C SPT16P32558 1035 aaKnown RBP9.93□□□□□ -0.82
YSR3YKR053C TRM7P38238 310 aaKnown RBP9.93□□□□□ -0.82
YSR3YKR053C EFM1P38732 585 aa9.93□□□□□ -0.82
YSR3YKR053C MUP3P38734 546 aa9.93□□□□□ -0.82
YSR3YKR053C YHR182WP38870 785 aa9.93□□□□□ -0.82
YSR3YKR053C REV7P38927 245 aa9.93□□□□□ -0.82
YSR3YKR053C PRP31P49704 494 aaPredicted RBP9.93□□□□□ -0.82
YSR3YKR053C HST3P53687 447 aa9.93□□□□□ -0.82
YSR3YKR053C TRM12Q04235 462 aa9.93□□□□□ -0.82
YSR3YKR053C BUD22Q04347 519 aaKnown RBP9.93□□□□□ -0.82
YSR3YKR053C UTP13Q05946 817 aaKnown RBP9.93□□□□□ -0.82
YSR3YKR053C YDR262WQ12331 272 aa9.93□□□□□ -0.82
YSR3YKR053C YMR030W-AQ3E760 96 aa9.93□□□□□ -0.82
YSR3YKR053C YIL046W-AQ3E7Z4 54 aa9.93□□□□□ -0.82
YSR3YKR053C SEC53P07283 254 aaKnown RBP9.92□□□□□ -0.82
YSR3YKR053C ILV2P07342 687 aaKnown RBP9.92□□□□□ -0.82
YSR3YKR053C MET8P15807 274 aa9.92□□□□□ -0.82
YSR3YKR053C TEC1P18412 486 aa9.92□□□□□ -0.82
YSR3YKR053C DAL82P21705 255 aa9.92□□□□□ -0.82
YSR3YKR053C CLB1P24868 471 aa9.92□□□□□ -0.82
YSR3YKR053C DEF1P35732 738 aaKnown RBP9.92□□□□□ -0.82
YSR3YKR053C YHR033WP38690 423 aa9.92□□□□□ -0.82
YSR3YKR053C GIC1P38785 314 aa9.92□□□□□ -0.82
YSR3YKR053C SPC97P38863 823 aa9.92□□□□□ -0.82
YSR3YKR053C SPF1P39986 1215 aaKnown RBP9.92□□□□□ -0.82
YSR3YKR053C PFA3P42836 336 aa9.92□□□□□ -0.82
YSR3YKR053C GCD14P46959 383 aaPredicted RBP9.92□□□□□ -0.82
YSR3YKR053C YNL058CP53947 316 aa9.92□□□□□ -0.82
YSR3YKR053C STP3Q05937 343 aa9.92□□□□□ -0.82
YSR3YKR053C UPC2Q12151 913 aa9.92□□□□□ -0.82
YSR3YKR053C SUL2Q12325 893 aa9.92□□□□□ -0.82
YSR3YKR053C RSR1P13856 272 aa9.91□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms