RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C WHI4Q07655 649 aaKnown RBP4.84□□□□□ -1.63
CAF4YKR036C RSB1Q08417 382 aa4.84□□□□□ -1.63
CAF4YKR036C YOR214CQ12282 236 aa4.84□□□□□ -1.63
CAF4YKR036C TSC13Q99190 310 aa4.84□□□□□ -1.63
CAF4YKR036C MRP2P10663 115 aaPredicted RBP4.84□□□□□ -1.64
CAF4YKR036C CDC20P26309 610 aa4.84□□□□□ -1.64
CAF4YKR036C URA7P28274 579 aaKnown RBP4.84□□□□□ -1.64
CAF4YKR036C RRN6P32786 894 aa4.84□□□□□ -1.64
CAF4YKR036C RAD54P32863 898 aa4.84□□□□□ -1.64
CAF4YKR036C NUP82P40368 713 aa4.84□□□□□ -1.64
CAF4YKR036C SRB7P47822 140 aa4.84□□□□□ -1.64
CAF4YKR036C RIM21P48565 533 aa4.84□□□□□ -1.64
CAF4YKR036C YGR111WP53265 400 aa4.84□□□□□ -1.64
CAF4YKR036C YDR249CQ03787 373 aa4.84□□□□□ -1.64
CAF4YKR036C IWR1Q07532 353 aaPredicted RBP4.84□□□□□ -1.64
CAF4YKR036C AAD15Q08361 143 aa4.84□□□□□ -1.64
CAF4YKR036C APC5Q08683 685 aa4.84□□□□□ -1.64
CAF4YKR036C RTC5Q12108 567 aaKnown RBP4.84□□□□□ -1.64
CAF4YKR036C YHR213W-AQ8TGT4 77 aa4.84□□□□□ -1.64
CAF4YKR036C MED11Q99278 115 aa4.84□□□□□ -1.64
CAF4YKR036C WHI2P12611 486 aa4.83□□□□□ -1.64
CAF4YKR036C PMS1P14242 873 aa4.83□□□□□ -1.64
CAF4YKR036C CMP2P14747 604 aa4.83□□□□□ -1.64
CAF4YKR036C NCP1P16603 691 aaKnown RBP4.83□□□□□ -1.64
CAF4YKR036C VMA1P17255 1071 aaKnown RBP4.83□□□□□ -1.64
CAF4YKR036C SAR1P20606 190 aaKnown RBP4.83□□□□□ -1.64
CAF4YKR036C ASF2P32448 525 aaPredicted RBP4.83□□□□□ -1.64
CAF4YKR036C PTR2P32901 601 aa4.83□□□□□ -1.64
CAF4YKR036C PEX6P33760 1030 aa4.83□□□□□ -1.64
CAF4YKR036C EGD2P38879 174 aaKnown RBP4.83□□□□□ -1.64
CAF4YKR036C EXO1P39875 702 aa4.83□□□□□ -1.64
CAF4YKR036C UTP18P40362 594 aaPredicted RBP4.83□□□□□ -1.64
CAF4YKR036C OYE3P41816 400 aaPredicted RBP4.83□□□□□ -1.64
CAF4YKR036C CCT7P42943 550 aaKnown RBP4.83□□□□□ -1.64
CAF4YKR036C SNZ3P43545 298 aa4.83□□□□□ -1.64
CAF4YKR036C GUF1P46943 645 aa4.83□□□□□ -1.64
CAF4YKR036C YJL045WP47052 634 aa4.83□□□□□ -1.64
CAF4YKR036C EFM3P47163 339 aa4.83□□□□□ -1.64
CAF4YKR036C MND1P53102 219 aa4.83□□□□□ -1.64
CAF4YKR036C FMP48P53233 369 aa4.83□□□□□ -1.64
CAF4YKR036C SNZ2P53824 298 aa4.83□□□□□ -1.64
CAF4YKR036C CAF40P53829 373 aa4.83□□□□□ -1.64
CAF4YKR036C OYE2Q03558 400 aaKnown RBP4.83□□□□□ -1.64
CAF4YKR036C SEG1Q04279 960 aa4.83□□□□□ -1.64
CAF4YKR036C PHM6Q05637 104 aa4.83□□□□□ -1.64
CAF4YKR036C ENT2Q05785 613 aa4.83□□□□□ -1.64
CAF4YKR036C YDR061WQ12298 539 aa4.83□□□□□ -1.64
CAF4YKR036C YPR1Q12458 312 aa4.83□□□□□ -1.64
CAF4YKR036C MOT1P32333 1867 aa4.83□□□□□ -1.64
CAF4YKR036C CAR1P00812 333 aaKnown RBP4.82□□□□□ -1.64
CAF4YKR036C YGL041W-AP0C5N3 154 aa4.82□□□□□ -1.64
CAF4YKR036C FBA1P14540 359 aaKnown RBP4.82□□□□□ -1.64
CAF4YKR036C SRO9P25567 434 aaKnown RBP4.82□□□□□ -1.64
CAF4YKR036C MRF1P30775 413 aaPredicted RBP4.82□□□□□ -1.64
CAF4YKR036C THI4P32318 326 aa4.82□□□□□ -1.64
CAF4YKR036C SRB2P34162 210 aa4.82□□□□□ -1.64
CAF4YKR036C ANR2P36090 516 aaPredicted RBP4.82□□□□□ -1.64
CAF4YKR036C MAK5P38112 773 aaPredicted RBP4.82□□□□□ -1.64
CAF4YKR036C YBR259WP38338 688 aa4.82□□□□□ -1.64
CAF4YKR036C YHK8P38776 514 aa4.82□□□□□ -1.64
CAF4YKR036C ATG7P38862 630 aa4.82□□□□□ -1.64
CAF4YKR036C PMC1P38929 1173 aaPredicted RBP4.82□□□□□ -1.64
CAF4YKR036C MBP1P39678 833 aa4.82□□□□□ -1.64
CAF4YKR036C ARC1P46672 376 aaKnown RBP4.82□□□□□ -1.64
CAF4YKR036C HOC1P47124 396 aa4.82□□□□□ -1.64
CAF4YKR036C YML6P51998 286 aa4.82□□□□□ -1.64
CAF4YKR036C SCY1P53009 804 aa4.82□□□□□ -1.64
CAF4YKR036C COG1P53079 417 aa4.82□□□□□ -1.64
CAF4YKR036C TPO2P53283 614 aa4.82□□□□□ -1.64
CAF4YKR036C MRX10Q05648 414 aa4.82□□□□□ -1.64
CAF4YKR036C VTA1Q06263 330 aa4.82□□□□□ -1.64
CAF4YKR036C YPS7Q06325 596 aa4.82□□□□□ -1.64
CAF4YKR036C RSC3Q06639 885 aa4.82□□□□□ -1.64
CAF4YKR036C CRD1Q07560 283 aa4.82□□□□□ -1.64
CAF4YKR036C YLL007CQ07799 665 aa4.82□□□□□ -1.64
CAF4YKR036C RSC58Q07979 502 aa4.82□□□□□ -1.64
CAF4YKR036C YNG1Q08465 219 aa4.82□□□□□ -1.64
CAF4YKR036C FEX1Q08913 375 aa4.82□□□□□ -1.64
CAF4YKR036C YPR022CQ12139 1133 aa4.82□□□□□ -1.64
CAF4YKR036C MCD1Q12158 566 aa4.82□□□□□ -1.64
CAF4YKR036C YOR012WQ12351 137 aa4.82□□□□□ -1.64
CAF4YKR036C PAB1P04147 577 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
CAF4YKR036C SGV1P23293 657 aaKnown RBP4.82□□□□□ -1.64
CAF4YKR036C GIT1P25346 518 aa4.82□□□□□ -1.64
CAF4YKR036C CWH43P25618 953 aa4.82□□□□□ -1.64
CAF4YKR036C URK1P27515 501 aa4.82□□□□□ -1.64
CAF4YKR036C SYN8P31377 255 aa4.82□□□□□ -1.64
CAF4YKR036C SPT14P32363 452 aa4.82□□□□□ -1.64
CAF4YKR036C YBL010CP32788 280 aa4.82□□□□□ -1.64
CAF4YKR036C RSM22P36056 628 aa4.82□□□□□ -1.64
CAF4YKR036C DRE2P36152 348 aa4.82□□□□□ -1.64
CAF4YKR036C SKG1P36169 355 aa4.82□□□□□ -1.64
CAF4YKR036C TDP1P38319 544 aa4.82□□□□□ -1.64
CAF4YKR036C YJL206CP39529 758 aa4.82□□□□□ -1.64
CAF4YKR036C YEL020CP39994 560 aa4.82□□□□□ -1.64
CAF4YKR036C OPT1P40897 799 aa4.82□□□□□ -1.64
CAF4YKR036C RRN7P40992 514 aa4.82□□□□□ -1.64
CAF4YKR036C YFL066CP43538 392 aa4.82□□□□□ -1.64
CAF4YKR036C ROG3P43602 733 aa4.82□□□□□ -1.64
CAF4YKR036C GUS1P46655 708 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms