RNA–Protein interactions for RNA: YER109C

FLO8, Transcript of Transcription factor, yeast

Gene FLO8, Length 2,400 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FLO8	YER109C	PEX8	P53248	589 aa		4.22	□□□□□ -1.73
FLO8	YER109C	CLD1	P53264	445 aa		4.22	□□□□□ -1.73
FLO8	YER109C	RPL34A	P87262	121 aa	Predicted RBP	4.22	□□□□□ -1.73
FLO8	YER109C	MRS2	Q01926	470 aa		4.22	□□□□□ -1.73
FLO8	YER109C	TFB2	Q02939	513 aa		4.22	□□□□□ -1.73
FLO8	YER109C	TAF11	Q04226	346 aa		4.22	□□□□□ -1.73
FLO8	YER109C	RCO1	Q04779	684 aa		4.22	□□□□□ -1.73
FLO8	YER109C	SEC10	Q06245	871 aa		4.22	□□□□□ -1.73
FLO8	YER109C	YDR056C	Q12025	205 aa		4.22	□□□□□ -1.73
FLO8	YER109C	PRP16	P15938	1071 aa	Predicted RBP	4.21	□□□□□ -1.74
FLO8	YER109C	UBA1	P22515	1024 aa	Known RBP	4.21	□□□□□ -1.74
FLO8	YER109C	MEF1	P25039	761 aa		4.21	□□□□□ -1.74
FLO8	YER109C	UTP9	P38882	575 aa	Known RBP	4.21	□□□□□ -1.74
FLO8	YER109C	TIF11	P38912	153 aa	Known RBP	4.21	□□□□□ -1.74
FLO8	YER109C	AXL1	P40851	1208 aa		4.21	□□□□□ -1.74
FLO8	YER109C	FLC3	P53121	802 aa		4.21	□□□□□ -1.74
FLO8	YER109C	MRM2	P53123	320 aa		4.21	□□□□□ -1.74
FLO8	YER109C	LSM3	P57743	89 aa	Known RBP	4.21	□□□□□ -1.74
FLO8	YER109C	YPL109C	Q02981	657 aa		4.21	□□□□□ -1.74
FLO8	YER109C	YDR338C	Q05497	695 aa		4.21	□□□□□ -1.74
FLO8	YER109C	VTA1	Q06263	330 aa		4.21	□□□□□ -1.74
FLO8	YER109C	ALR1	Q08269	859 aa		4.21	□□□□□ -1.74
FLO8	YER109C	PST1	Q12355	444 aa		4.21	□□□□□ -1.74
FLO8	YER109C	GPR1	Q12361	961 aa		4.21	□□□□□ -1.74
FLO8	YER109C	NAG1	Q8TGN9	163 aa		4.21	□□□□□ -1.74
FLO8	YER109C	MEX67	Q99257	599 aa	Known RBP	4.21	□□□□□ -1.74
FLO8	YER109C	RHO2	P06781	192 aa		4.21	□□□□□ -1.74
FLO8	YER109C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
FLO8	YER109C	ABF1	P14164	731 aa		4.21	□□□□□ -1.74
FLO8	YER109C	EPT1	P22140	391 aa		4.21	□□□□□ -1.74
FLO8	YER109C	DCW1	P36091	449 aa		4.21	□□□□□ -1.74
FLO8	YER109C	SRP72	P38688	640 aa	Known RBP	4.21	□□□□□ -1.74
FLO8	YER109C	MUP3	P38734	546 aa		4.21	□□□□□ -1.74
FLO8	YER109C	SEC27	P41811	889 aa	Known RBP	4.21	□□□□□ -1.74
FLO8	YER109C	TEL2	P53038	688 aa		4.21	□□□□□ -1.74
FLO8	YER109C	TAF6	P53040	516 aa		4.21	□□□□□ -1.74
FLO8	YER109C	IPI3	P53877	555 aa		4.21	□□□□□ -1.74
FLO8	YER109C	PPN1	Q04119	674 aa		4.21	□□□□□ -1.74
FLO8	YER109C	YPL225W	Q08971	146 aa	Known RBP	4.21	□□□□□ -1.74
FLO8	YER109C	HUA2	Q12134	243 aa		4.21	□□□□□ -1.74
FLO8	YER109C	YPT6	Q99260	215 aa		4.21	□□□□□ -1.74
FLO8	YER109C	DST1	P07273	309 aa		4.2	□□□□□ -1.74
FLO8	YER109C	FUM1	P08417	488 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	TUB1	P09733	447 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	EMC1	P25574	760 aa		4.2	□□□□□ -1.74
FLO8	YER109C	GUT2	P32191	649 aa		4.2	□□□□□ -1.74
FLO8	YER109C	MVD1	P32377	396 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	MF(ALPHA)2	P32435	120 aa		4.2	□□□□□ -1.74
FLO8	YER109C	SKT5	P34226	696 aa		4.2	□□□□□ -1.74
FLO8	YER109C	SPT23	P35210	1082 aa		4.2	□□□□□ -1.74
FLO8	YER109C	LRG1	P35688	1017 aa		4.2	□□□□□ -1.74
FLO8	YER109C	DEF1	P35732	738 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
FLO8	YER109C	PIK1	P39104	1066 aa		4.2	□□□□□ -1.74
FLO8	YER109C	HAT2	P39984	401 aa		4.2	□□□□□ -1.74
FLO8	YER109C	TIF34	P40217	347 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	GAT1	P43574	510 aa		4.2	□□□□□ -1.74
FLO8	YER109C	MNN10	P50108	393 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	IST1	P53843	298 aa	Predicted RBP	4.2	□□□□□ -1.74
FLO8	YER109C	SPO20	Q04359	397 aa		4.2	□□□□□ -1.74
FLO8	YER109C	YDR109C	Q04585	715 aa		4.2	□□□□□ -1.74
FLO8	YER109C	CIA1	Q05583	330 aa		4.2	□□□□□ -1.74
FLO8	YER109C	OPI10	Q08202	246 aa		4.2	□□□□□ -1.74
FLO8	YER109C	HSC82	P15108	705 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	RPB4	P20433	221 aa	Predicted RBP	4.2	□□□□□ -1.74
FLO8	YER109C	YCR090C	P25654	182 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	RAD14	P28519	371 aa		4.2	□□□□□ -1.74
FLO8	YER109C	SPS19	P32573	292 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	PMT1	P33775	817 aa		4.2	□□□□□ -1.74
FLO8	YER109C	SQT1	P35184	431 aa		4.2	□□□□□ -1.74
FLO8	YER109C	YBL029W	P38201	376 aa		4.2	□□□□□ -1.74
FLO8	YER109C	YHR078W	P38799	552 aa		4.2	□□□□□ -1.74
FLO8	YER109C	CYC2	P38909	366 aa		4.2	□□□□□ -1.74
FLO8	YER109C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
FLO8	YER109C	MNN1	P39106	762 aa		4.2	□□□□□ -1.74
FLO8	YER109C	YJR061W	P40355	935 aa		4.2	□□□□□ -1.74
FLO8	YER109C	USE1	P53146	245 aa		4.2	□□□□□ -1.74
FLO8	YER109C	EFM5	P53200	248 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	SWC4	P53201	476 aa		4.2	□□□□□ -1.74
FLO8	YER109C	ART5	P53244	586 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	SLT2	Q00772	484 aa		4.2	□□□□□ -1.74
FLO8	YER109C	ARG7	Q04728	441 aa		4.2	□□□□□ -1.74
FLO8	YER109C	BLS1	Q06071	122 aa		4.2	□□□□□ -1.74
FLO8	YER109C	VAM6	Q07468	1049 aa		4.2	□□□□□ -1.74
FLO8	YER109C	HBT1	Q07653	1046 aa	Known RBP	4.2	□□□□□ -1.74
FLO8	YER109C	YLR049C	Q12110	428 aa		4.2	□□□□□ -1.74
FLO8	YER109C	MPD2	Q99316	277 aa		4.2	□□□□□ -1.74
FLO8	YER109C	CPA1	P07258	411 aa	Known RBP	4.19	□□□□□ -1.74
FLO8	YER109C	FPR1	P20081	114 aa	Known RBP	4.19	□□□□□ -1.74
FLO8	YER109C	YCK2	P23292	546 aa	Known RBP	4.19	□□□□□ -1.74
FLO8	YER109C	CIN8	P27895	1000 aa		4.19	□□□□□ -1.74
FLO8	YER109C	GMH1	P36125	273 aa		4.19	□□□□□ -1.74
FLO8	YER109C	GIP1	P38229	639 aa		4.19	□□□□□ -1.74
FLO8	YER109C	YHL008C	P38750	627 aa		4.19	□□□□□ -1.74
FLO8	YER109C	GGA2	P38817	585 aa	Known RBP	4.19	□□□□□ -1.74
FLO8	YER109C	RPL34B	P40525	121 aa	Known RBP	4.19	□□□□□ -1.74
FLO8	YER109C	IME4	P41833	600 aa		4.19	□□□□□ -1.74
FLO8	YER109C	ATH1	P48016	1211 aa		4.19	□□□□□ -1.74
FLO8	YER109C	NIS1	P53939	407 aa		4.19	□□□□□ -1.74
FLO8	YER109C	SUB1	P54000	292 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 94.9 ms