RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 RTKNQ9BST9 563 aa5.19□□□□□ -1.58
GABRA1-220ENST00000638159 RPAP3Q9H6T3 665 aaPredicted RBP5.19□□□□□ -1.58
GABRA1-220ENST00000638159 MUTYHQ9UIF7 546 aa5.19□□□□□ -1.58
GABRA1-220ENST00000638159 KIAA0355O15063 1070 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 ITGA7Q13683 1181 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 HERC6Q8IVU3 1022 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 GDPD5Q8WTR4 605 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 RNF25Q96BH1 459 aaPredicted RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 TINF2Q9BSI4 451 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 BCAS3Q9H6U6 928 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 CACNA1HO95180 2353 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 DPYSL4O14531 572 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 SMPD1P17405 629 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 GBP1P32455 592 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 PPM1FP49593 454 aaPredicted RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 ICA1Q05084 483 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 RNASELQ05823 741 aaKnown RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 LEXMQ3ZCV2 418 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 TBC1D9Q6ZT07 1266 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 EEPD1Q7L9B9 569 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 RPAINQ86UA6 219 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 FAM178BQ8IXR5 827 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 HACE1Q8IYU2 909 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 LINS1Q8NG48 757 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 AFG1LQ8WV93 481 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 IL17RAQ96F46 866 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 SAP30BPQ9UHR5 308 aaKnown RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 FBXO3Q9UK99 471 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 R3HCC1Q9Y3T6 440 aaKnown RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 ASXL3Q9C0F0 2248 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 RPAP1Q9BWH6 1393 aaPredicted RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 SCN4AP35499 1836 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 ALAS1P13196 640 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 POLA2Q14181 598 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 MAPKAPK5Q8IW41 473 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 LPIN2Q92539 896 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 TMEM169Q96HH4 297 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 MLXIPQ9HAP2 919 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 ZNF215Q9UL58 517 aaPredicted RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 POLIQ9UNA4 740 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 A0A0G2JLL6 359 aaPredicted RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 DUSP11O75319 330 aaKnown RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 CCDC192P0DO97 292 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 CYP7A1P22680 504 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 ELF2Q15723 593 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 KCNA10Q16322 511 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 FSCN1Q16658 493 aaKnown RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 ZSCAN25Q6NSZ9 544 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 PRRT2Q7Z6L0 340 aaPredicted RBP5.18□□□□□ -1.58
GABRA1-220ENST00000638159 RNF135Q8IUD6 432 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 USP38Q8NB14 1042 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 APOL6Q9BWW8 343 aa5.18□□□□□ -1.58
GABRA1-220ENST00000638159 COL24A1Q17RW2 1714 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 EMSYQ7Z589 1322 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 A0A1W2PQ45 241 aaPredicted RBP5.17□□□□□ -1.58
GABRA1-220ENST00000638159 A0A1W2PQY0 241 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 FDX1P10109 184 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 TTLL4Q14679 1199 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 C1orf228Q6PIY5 440 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 CXCL17Q6UXB2 119 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 RBM23Q86U06 439 aaKnown RBP5.17□□□□□ -1.58
GABRA1-220ENST00000638159 CAGE1Q8TC20 777 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 MS4A4AQ96JQ5 239 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 ZDHHC15Q96MV8 337 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 TEX13BQ9BXU2 312 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 GH2P01242 217 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 ZSCAN20P17040 1043 aaPredicted RBP5.17□□□□□ -1.58
GABRA1-220ENST00000638159 TRIM28Q13263 835 aaKnown RBP5.17□□□□□ -1.58
GABRA1-220ENST00000638159 GRB10Q13322 594 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 UAP1L1Q3KQV9 507 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 XRRA1Q6P2D8 792 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 HAUS6Q7Z4H7 955 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 FRMD5Q7Z6J6 570 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 GLG1Q92896 1179 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 KIFC2Q96AC6 838 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 CCDC17Q96LX7 622 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 EHMT1Q9H9B1 1298 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 UBN2Q6ZU65 1347 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 RFXAPO00287 272 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 HOXA2O43364 376 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 RB1P06400 928 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 FOXC1Q12948 553 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 ZNF605Q86T29 641 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 EDAQ92838 391 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 CUL5Q93034 780 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 PRIMPOLQ96LW4 560 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 APOL5Q9BWW9 433 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 SPATC1LQ9H0A9 340 aa5.17□□□□□ -1.58
GABRA1-220ENST00000638159 CHMP4BQ9H444 224 aaKnown RBP5.17□□□□□ -1.58
GABRA1-220ENST00000638159 LAMB4A4D0S4 1761 aa5.16□□□□□ -1.58
GABRA1-220ENST00000638159 RFX7Q2KHR2 1363 aa5.16□□□□□ -1.58
GABRA1-220ENST00000638159 DENND3A2RUS2 1198 aa5.16□□□□□ -1.58
GABRA1-220ENST00000638159 PI4K2BG5E9Z4 385 aa5.16□□□□□ -1.58
GABRA1-220ENST00000638159 ASGR1P07306 291 aa5.16□□□□□ -1.58
GABRA1-220ENST00000638159 BMP1P13497 986 aa5.16□□□□□ -1.58
GABRA1-220ENST00000638159 TMEM240Q5SV17 173 aa5.16□□□□□ -1.58
GABRA1-220ENST00000638159 NOL9Q5SY16 702 aaKnown RBP5.16□□□□□ -1.58
GABRA1-220ENST00000638159 LIN9Q5TKA1 542 aa5.16□□□□□ -1.58
GABRA1-220ENST00000638159 SNRNP48Q6IEG0 339 aaKnown RBP5.16□□□□□ -1.58
GABRA1-220ENST00000638159 MCM9Q9NXL9 1143 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms