RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
CLN6-213ENST00000636212 REPS2Q8NFH8 660 aa22.44■■□□□ 1.18
CLN6-213ENST00000636212 CHURC1Q8WUH1 139 aa22.44■■□□□ 1.18
CLN6-213ENST00000636212 DIAPH3Q9NSV4 1193 aa22.44■■□□□ 1.18
CLN6-213ENST00000636212 ZMYM6O95789 1325 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 FOXP2O15409 715 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 ORC4O43929 436 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 FGAP02671 866 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 HSPD1P10809 573 aaKnown RBP22.43■■□□□ 1.18
CLN6-213ENST00000636212 SDSP20132 328 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 SLC1A4P43007 532 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 FAM160B2Q86V87 743 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 C7orf61Q8IZ16 206 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 CPXCR1Q8N123 301 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 DDX11Q96FC9 970 aa22.43■■□□□ 1.18
CLN6-213ENST00000636212 DIS3Q9Y2L1 958 aaKnown RBP22.43■■□□□ 1.18
CLN6-213ENST00000636212 ATP2A1O14983 1001 aa22.42■■□□□ 1.18
CLN6-213ENST00000636212 MNX1P50219 401 aaPredicted RBP22.42■■□□□ 1.18
CLN6-213ENST00000636212 STAT2P52630 851 aa22.42■■□□□ 1.18
CLN6-213ENST00000636212 RRP12Q5JTH9 1297 aaKnown RBP22.42■■□□□ 1.18
CLN6-213ENST00000636212 ARRDC4Q8NCT1 418 aa22.42■■□□□ 1.18
CLN6-213ENST00000636212 GMCL1Q96IK5 515 aa22.42■■□□□ 1.18
CLN6-213ENST00000636212 FBXO40Q9UH90 709 aa22.42■■□□□ 1.18
CLN6-213ENST00000636212 NRBP1Q9UHY1 535 aa22.42■■□□□ 1.18
CLN6-213ENST00000636212 TMEM232C9JQI7 657 aa22.41■■□□□ 1.18
CLN6-213ENST00000636212 SEPT4O43236 478 aa22.41■■□□□ 1.18
CLN6-213ENST00000636212 PGK2P07205 417 aa22.41■■□□□ 1.18
CLN6-213ENST00000636212 OAZ1P54368 228 aa22.41■■□□□ 1.18
CLN6-213ENST00000636212 SLC38A10Q9HBR0 1119 aa22.41■■□□□ 1.18
CLN6-213ENST00000636212 IGHA2P01877 340 aa22.4■■□□□ 1.18
CLN6-213ENST00000636212 PCP11498 1178 aaKnown RBP22.4■■□□□ 1.18
CLN6-213ENST00000636212 MCCP23508 829 aa22.4■■□□□ 1.18
CLN6-213ENST00000636212 ZNF589Q86UQ0 364 aaPredicted RBP22.4■■□□□ 1.18
CLN6-213ENST00000636212 TRPV1Q8NER1 839 aa22.4■■□□□ 1.18
CLN6-213ENST00000636212 STAG1Q8WVM7 1258 aa22.4■■□□□ 1.18
CLN6-213ENST00000636212 RAVER2Q9HCJ3 691 aaKnown RBP22.4■■□□□ 1.18
CLN6-213ENST00000636212 INCENPQ9NQS7 918 aa22.4■■□□□ 1.18
CLN6-213ENST00000636212 KBTBD13C9JR72 458 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 DNM1LO00429 736 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 COL6A1P12109 1028 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 ZNF792Q3KQV3 632 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 MFSD6Q6ZSS7 791 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 ANKRD35Q8N283 1001 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 CHST13Q8NET6 341 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 TINF2Q9BSI4 451 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 RNF41Q9H4P4 317 aaPredicted RBP22.39■■□□□ 1.17
CLN6-213ENST00000636212 IL17RBQ9NRM6 502 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 CNPY2Q9Y2B0 182 aa22.39■■□□□ 1.17
CLN6-213ENST00000636212 PFASO15067 1338 aa22.38■■□□□ 1.17
CLN6-213ENST00000636212 FGRP09769 529 aa22.38■■□□□ 1.17
CLN6-213ENST00000636212 RCSD1Q6JBY9 416 aa22.38■■□□□ 1.17
CLN6-213ENST00000636212 CWC27Q6UX04 472 aaKnown RBP22.38■■□□□ 1.17
CLN6-213ENST00000636212 SENP6Q9GZR1 1112 aaPredicted RBP22.38■■□□□ 1.17
CLN6-213ENST00000636212 MTMR7Q9Y216 660 aa22.38■■□□□ 1.17
CLN6-213ENST00000636212 FRMPD3Q5JV73 1810 aa22.38■■□□□ 1.17
CLN6-213ENST00000636212 ZNF213O14771 459 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 NMT2O60551 498 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 PLA2G6O60733 806 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 MYCNP04198 464 aaPredicted RBP22.37■■□□□ 1.17
CLN6-213ENST00000636212 HAND2P61296 217 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 CCDC96Q2M329 555 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 PRAMEF19Q5SWL8 479 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 AKNAD1Q5T1N1 836 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 MSL3Q8N5Y2 521 aaKnown RBP22.37■■□□□ 1.17
CLN6-213ENST00000636212 CHMP4CQ96CF2 233 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 RBM27Q9P2N5 1060 aaKnown RBP22.37■■□□□ 1.17
CLN6-213ENST00000636212 RIPK3Q9Y572 518 aa22.37■■□□□ 1.17
CLN6-213ENST00000636212 ZNFX1Q9P2E3 1918 aaKnown RBP22.37■■□□□ 1.17
CLN6-213ENST00000636212 RARBP10826 455 aa22.36■■□□□ 1.17
CLN6-213ENST00000636212 ANO1Q5XXA6 986 aa22.36■■□□□ 1.17
CLN6-213ENST00000636212 KCTD1Q719H9 257 aa22.36■■□□□ 1.17
CLN6-213ENST00000636212 DCAF4Q8WV16 495 aa22.36■■□□□ 1.17
CLN6-213ENST00000636212 TCP11L1Q9NUJ3 509 aa22.36■■□□□ 1.17
CLN6-213ENST00000636212 ZMYND8Q9ULU4 1186 aaPredicted RBP22.36■■□□□ 1.17
CLN6-213ENST00000636212 A0A1W2PPC1 479 aa22.35■■□□□ 1.17
CLN6-213ENST00000636212 TOP1P11387 765 aaKnown RBP22.35■■□□□ 1.17
CLN6-213ENST00000636212 NT5C2P49902 561 aa22.35■■□□□ 1.17
CLN6-213ENST00000636212 TKFCQ3LXA3 575 aa22.35■■□□□ 1.17
CLN6-213ENST00000636212 GJC2Q5T442 439 aaPredicted RBP22.35■■□□□ 1.17
CLN6-213ENST00000636212 ESR2Q92731 530 aa22.35■■□□□ 1.17
CLN6-213ENST00000636212 ACAD9Q9H845 621 aa22.35■■□□□ 1.17
CLN6-213ENST00000636212 HOMER2Q9NSB8 354 aa22.35■■□□□ 1.17
CLN6-213ENST00000636212 PLXNA1Q9UIW2 1896 aa22.34■■□□□ 1.17
CLN6-213ENST00000636212 SYNGAP1Q96PV0 1343 aa22.34■■□□□ 1.17
CLN6-213ENST00000636212 ALPK3Q96L96 1907 aa22.34■■□□□ 1.17
CLN6-213ENST00000636212 FXR1P51114 621 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLN6-213ENST00000636212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLN6-213ENST00000636212 TACC3Q9Y6A5 838 aa22.34■■□□□ 1.17
CLN6-213ENST00000636212 AKR1A1P14550 325 aa22.33■■□□□ 1.17
CLN6-213ENST00000636212 NOVP48745 357 aa22.33■■□□□ 1.17
CLN6-213ENST00000636212 IRX6P78412 446 aaPredicted RBP22.33■■□□□ 1.17
CLN6-213ENST00000636212 LRRC26Q2I0M4 334 aa22.33■■□□□ 1.17
CLN6-213ENST00000636212 ZNF467Q7Z7K2 595 aaPredicted RBP22.33■■□□□ 1.17
CLN6-213ENST00000636212 TTC14Q96N46 770 aa22.33■■□□□ 1.17
CLN6-213ENST00000636212 XPNPEP3Q9NQH7 507 aa22.33■■□□□ 1.17
CLN6-213ENST00000636212 CTNNA3Q9UI47 895 aa22.33■■□□□ 1.17
CLN6-213ENST00000636212 DNAJC25-GNG10A0A024R161 153 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 SYN1P17600 705 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 CCDC178Q5BJE1 867 aa22.32■■□□□ 1.16
CLN6-213ENST00000636212 RNF180Q86T96 592 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms