RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CCDC17Q96LX7 622 aa22.45■■□□□ 1.19
TREX1-205ENST00000625293 NAT10Q9H0A0 1025 aaKnown RBP22.45■■□□□ 1.19
TREX1-205ENST00000625293 PCDHA6Q9UN73 950 aa22.45■■□□□ 1.19
TREX1-205ENST00000625293 PCDHA8Q9Y5H6 950 aa22.45■■□□□ 1.19
TREX1-205ENST00000625293 PTMAP06454 111 aaKnown RBP22.45■■□□□ 1.18
TREX1-205ENST00000625293 RBM5P52756 815 aaKnown RBP eCLIP22.45■■□□□ 1.18
TREX1-205ENST00000625293 USP49Q70CQ1 688 aa22.45■■□□□ 1.18
TREX1-205ENST00000625293 CLEC10AQ8IUN9 316 aa22.45■■□□□ 1.18
TREX1-205ENST00000625293 ZMYND12Q9H0C1 365 aa22.45■■□□□ 1.18
TREX1-205ENST00000625293 MYH8P13535 1937 aa22.44■■□□□ 1.18
TREX1-205ENST00000625293 POTECB2RU33 542 aa22.44■■□□□ 1.18
TREX1-205ENST00000625293 SLURP2P0DP57 97 aa22.44■■□□□ 1.18
TREX1-205ENST00000625293 ZNF75DP51815 510 aa22.44■■□□□ 1.18
TREX1-205ENST00000625293 PNOCQ13519 176 aa22.44■■□□□ 1.18
TREX1-205ENST00000625293 RRP36Q96EU6 259 aaKnown RBP22.44■■□□□ 1.18
TREX1-205ENST00000625293 PI4KBQ9UBF8 816 aa22.44■■□□□ 1.18
TREX1-205ENST00000625293 CLIP2Q9UDT6 1046 aa22.44■■□□□ 1.18
TREX1-205ENST00000625293 COL2A1P02458 1487 aaPredicted RBP22.44■■□□□ 1.18
TREX1-205ENST00000625293 ATRNL1Q5VV63 1379 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 ACTN4O43707 911 aaKnown RBP22.43■■□□□ 1.18
TREX1-205ENST00000625293 PTGDRQ13258 359 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 CFAP100Q494V2 611 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 FOXP4Q8IVH2 680 aaPredicted RBP22.43■■□□□ 1.18
TREX1-205ENST00000625293 C4orf32Q8N8J7 132 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 RASGRP4Q8TDF6 673 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 GOLGA6L19H0YKK7 550 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 KIF3CO14782 793 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 POLR2DO15514 142 aaKnown RBP22.43■■□□□ 1.18
TREX1-205ENST00000625293 TCP10Q12799 353 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 DPY19L2Q6NUT2 758 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 NIM1KQ8IY84 436 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 PIGSQ96S52 555 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 SERTAD1Q9UHV2 236 aa22.43■■□□□ 1.18
TREX1-205ENST00000625293 BIN1O00499 593 aa22.42■■□□□ 1.18
TREX1-205ENST00000625293 ENTPD3O75355 529 aa22.42■■□□□ 1.18
TREX1-205ENST00000625293 MSNP26038 577 aaKnown RBP22.42■■□□□ 1.18
TREX1-205ENST00000625293 EIF6P56537 245 aaKnown RBP22.42■■□□□ 1.18
TREX1-205ENST00000625293 ZNF543Q08ER8 600 aa22.42■■□□□ 1.18
TREX1-205ENST00000625293 ZRSR1Q15695 479 aaKnown RBP22.42■■□□□ 1.18
TREX1-205ENST00000625293 PPP4R3BQ5MIZ7 849 aa22.42■■□□□ 1.18
TREX1-205ENST00000625293 TATDN1Q6P1N9 297 aa22.42■■□□□ 1.18
TREX1-205ENST00000625293 AOPEPQ8N6M6 819 aa22.42■■□□□ 1.18
TREX1-205ENST00000625293 CCDC12Q8WUD4 166 aaPredicted RBP22.42■■□□□ 1.18
TREX1-205ENST00000625293 GMLQ99445 158 aa22.42■■□□□ 1.18
TREX1-205ENST00000625293 UBA5Q9GZZ9 404 aa22.42■■□□□ 1.18
TREX1-205ENST00000625293 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.42■■□□□ 1.18
TREX1-205ENST00000625293 FRMPD2Q68DX3 1309 aaPredicted RBP22.42■■□□□ 1.18
TREX1-205ENST00000625293 ZC3H4Q9UPT8 1303 aaKnown RBP22.42■■□□□ 1.18
TREX1-205ENST00000625293 ESYT2A0FGR8 921 aa22.41■■□□□ 1.18
TREX1-205ENST00000625293 hCG_1984214I3L0E3 225 aa22.41■■□□□ 1.18
TREX1-205ENST00000625293 FOXN1O15353 648 aa22.41■■□□□ 1.18
TREX1-205ENST00000625293 NT5DC1Q5TFE4 455 aa22.41■■□□□ 1.18
TREX1-205ENST00000625293 RSBN1LQ6PCB5 846 aaPredicted RBP22.41■■□□□ 1.18
TREX1-205ENST00000625293 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.41■■□□□ 1.18
TREX1-205ENST00000625293 ZNF713Q8N859 430 aaPredicted RBP22.41■■□□□ 1.18
TREX1-205ENST00000625293 PRMT6Q96LA8 375 aaPredicted RBP22.41■■□□□ 1.18
TREX1-205ENST00000625293 VPS33BQ9H267 617 aa22.41■■□□□ 1.18
TREX1-205ENST00000625293 GJA3Q9Y6H8 435 aa22.41■■□□□ 1.18
TREX1-205ENST00000625293 A0A087X0B3 334 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 BECN2A8MW95 431 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 ZNF500O60304 480 aaPredicted RBP22.4■■□□□ 1.18
TREX1-205ENST00000625293 RAD17O75943 681 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 VIL1P09327 827 aaKnown RBP22.4■■□□□ 1.18
TREX1-205ENST00000625293 NAPAP54920 295 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 ARL6IP4Q66PJ3 421 aaKnown RBP22.4■■□□□ 1.18
TREX1-205ENST00000625293 SYMPKQ92797 1274 aaKnown RBP22.4■■□□□ 1.18
TREX1-205ENST00000625293 EPSTI1Q96J88 318 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 TDRD3Q9H7E2 651 aaKnown RBP22.4■■□□□ 1.18
TREX1-205ENST00000625293 SEC63Q9UGP8 760 aaKnown RBP22.4■■□□□ 1.18
TREX1-205ENST00000625293 PCDHA5Q9Y5H7 936 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 CCDC194A0A1B0GVG4 234 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 CDC25BP30305 580 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 MCM7P33993 719 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 SARSP49591 514 aaKnown RBP22.4■■□□□ 1.18
TREX1-205ENST00000625293 CXCL9Q07325 125 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 POSTNQ15063 836 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 IL17AQ16552 155 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 HOMER1Q86YM7 354 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 MKL1Q969V6 931 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 HOOK1Q9UJC3 728 aaKnown RBP22.4■■□□□ 1.18
TREX1-205ENST00000625293 ZNRF3Q9ULT6 936 aa22.4■■□□□ 1.18
TREX1-205ENST00000625293 NCAPHQ15003 741 aa22.39■■□□□ 1.17
TREX1-205ENST00000625293 KANK3Q6NY19 840 aa22.39■■□□□ 1.17
TREX1-205ENST00000625293 TRIM5Q9C035 493 aa22.39■■□□□ 1.17
TREX1-205ENST00000625293 FAM196BA6NMK8 535 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 MPHOSPH10O00566 681 aaKnown RBP22.38■■□□□ 1.17
TREX1-205ENST00000625293 PRR29P0C7W0 189 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 CERKLQ49MI3 558 aaPredicted RBP22.38■■□□□ 1.17
TREX1-205ENST00000625293 SH3RF1Q7Z6J0 888 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 SPATA20Q8TB22 786 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 VAT1LQ9HCJ6 419 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 C6orf50Q9HD87 102 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 NYAP2Q9P242 653 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 VWA3AA6NCI4 1184 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 SMCO2A6NFE2 343 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 PSMD14O00487 310 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 GNA11P29992 359 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 GPATCH4Q5T3I0 446 aaKnown RBP22.38■■□□□ 1.17
TREX1-205ENST00000625293 PDILTQ8N807 584 aa22.38■■□□□ 1.17
TREX1-205ENST00000625293 SPDYE2BA6NHP3 402 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms