RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 SNRNP48Q6IEG0 339 aaKnown RBP24■■□□□ 1.43
ITM2C-210ENST00000620962 MAMDC4Q6UXC1 1216 aa24■■□□□ 1.43
ITM2C-210ENST00000620962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24■■□□□ 1.43
ITM2C-210ENST00000620962 PRPF38AQ8NAV1 312 aaKnown RBP24■■□□□ 1.43
ITM2C-210ENST00000620962 FAM161BQ96MY7 647 aa24■■□□□ 1.43
ITM2C-210ENST00000620962 NUP88Q99567 741 aaPredicted RBP24■■□□□ 1.43
ITM2C-210ENST00000620962 TSEN34Q9BSV6 310 aaKnown RBP24■■□□□ 1.43
ITM2C-210ENST00000620962 A0A0C4DFX4 3053 aa24■■□□□ 1.43
ITM2C-210ENST00000620962 IGKV6D-41A0A0C4DH26 115 aa23.99■■□□□ 1.43
ITM2C-210ENST00000620962 ZFYP08048 801 aaPredicted RBP23.99■■□□□ 1.43
ITM2C-210ENST00000620962 GPATCH3Q96I76 525 aa23.99■■□□□ 1.43
ITM2C-210ENST00000620962 ZNF287Q9HBT7 754 aa23.99■■□□□ 1.43
ITM2C-210ENST00000620962 SYNPO2Q9UMS6 1093 aa23.99■■□□□ 1.43
ITM2C-210ENST00000620962 LAMA2P24043 3122 aaKnown RBP23.99■■□□□ 1.43
ITM2C-210ENST00000620962 MINDY4BA8MYZ0 360 aa23.98■■□□□ 1.43
ITM2C-210ENST00000620962 KIAA0355O15063 1070 aa23.98■■□□□ 1.43
ITM2C-210ENST00000620962 RNF113AO15541 343 aaKnown RBP23.98■■□□□ 1.43
ITM2C-210ENST00000620962 GNAT2P19087 354 aa23.98■■□□□ 1.43
ITM2C-210ENST00000620962 C20orf194Q5TEA3 1177 aa23.98■■□□□ 1.43
ITM2C-210ENST00000620962 ZNF467Q7Z7K2 595 aaPredicted RBP23.98■■□□□ 1.43
ITM2C-210ENST00000620962 MKL1Q969V6 931 aa23.98■■□□□ 1.43
ITM2C-210ENST00000620962 RIPK3Q9Y572 518 aa23.98■■□□□ 1.43
ITM2C-210ENST00000620962 GPAA1O43292 621 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 SNAI1O95863 264 aaPredicted RBP23.97■■□□□ 1.43
ITM2C-210ENST00000620962 ITGB8P26012 769 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 ANKRD33Q7Z3H0 272 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.97■■□□□ 1.43
ITM2C-210ENST00000620962 KLHDC9Q8NEP7 349 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 DDX11Q96FC9 970 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 TOX2Q96NM4 488 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 SEMA6BQ9H3T3 888 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 DCTPP1Q9H773 170 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 EPB41L4AQ9HCS5 686 aaPredicted RBP23.97■■□□□ 1.43
ITM2C-210ENST00000620962 CLIP2Q9UDT6 1046 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 FAM184BQ9ULE4 1060 aa23.97■■□□□ 1.43
ITM2C-210ENST00000620962 SYNRGQ9UMZ2 1314 aa23.96■■□□□ 1.43
ITM2C-210ENST00000620962 MOXD2PA6NHM9 499 aa23.96■■□□□ 1.43
ITM2C-210ENST00000620962 ZBED4O75132 1171 aa23.96■■□□□ 1.43
ITM2C-210ENST00000620962 ZNF444Q8N0Y2 327 aaPredicted RBP23.96■■□□□ 1.43
ITM2C-210ENST00000620962 STK11IPQ8N1F8 1099 aa23.96■■□□□ 1.43
ITM2C-210ENST00000620962 NUP133Q8WUM0 1156 aa23.96■■□□□ 1.43
ITM2C-210ENST00000620962 LENG1Q96BZ8 264 aaPredicted RBP23.96■■□□□ 1.43
ITM2C-210ENST00000620962 PLIN4Q96Q06 1357 aa23.95■■□□□ 1.42
ITM2C-210ENST00000620962 MCM3APO60318 1980 aa23.95■■□□□ 1.42
ITM2C-210ENST00000620962 UNC80Q8N2C7 3258 aa23.95■■□□□ 1.42
ITM2C-210ENST00000620962 TDO2P48775 406 aa23.95■■□□□ 1.42
ITM2C-210ENST00000620962 ACLYP53396 1101 aa23.95■■□□□ 1.42
ITM2C-210ENST00000620962 CDX2Q99626 313 aaPredicted RBP23.95■■□□□ 1.42
ITM2C-210ENST00000620962 SLC38A10Q9HBR0 1119 aa23.95■■□□□ 1.42
ITM2C-210ENST00000620962 MTMR4Q9NYA4 1195 aa23.95■■□□□ 1.42
ITM2C-210ENST00000620962 FEM1BQ9UK73 627 aa23.95■■□□□ 1.42
ITM2C-210ENST00000620962 PQBP1O60828 265 aaKnown RBP23.94■■□□□ 1.42
ITM2C-210ENST00000620962 DUSP11O75319 330 aaKnown RBP23.94■■□□□ 1.42
ITM2C-210ENST00000620962 RAG1P15918 1043 aa23.94■■□□□ 1.42
ITM2C-210ENST00000620962 OAZ1P54368 228 aa23.94■■□□□ 1.42
ITM2C-210ENST00000620962 LRRFIP1Q32MZ4 808 aaKnown RBP23.94■■□□□ 1.42
ITM2C-210ENST00000620962 CCSAPQ6IQ19 270 aaPredicted RBP23.94■■□□□ 1.42
ITM2C-210ENST00000620962 CPXCR1Q8N123 301 aa23.94■■□□□ 1.42
ITM2C-210ENST00000620962 GMCL1P1Q8NEA9 526 aa23.94■■□□□ 1.42
ITM2C-210ENST00000620962 CEP95Q96GE4 821 aa23.94■■□□□ 1.42
ITM2C-210ENST00000620962 STARD7Q9NQZ5 370 aa23.94■■□□□ 1.42
ITM2C-210ENST00000620962 FBXO40Q9UH90 709 aa23.94■■□□□ 1.42
ITM2C-210ENST00000620962 CTDP1Q9Y5B0 961 aaPredicted RBP23.94■■□□□ 1.42
ITM2C-210ENST00000620962 TMEM265A0A087WTH1 108 aa23.93■■□□□ 1.42
ITM2C-210ENST00000620962 TTLL1O95922 423 aa23.93■■□□□ 1.42
ITM2C-210ENST00000620962 CST5P28325 142 aaPredicted RBP23.93■■□□□ 1.42
ITM2C-210ENST00000620962 TSHZ3Q63HK5 1081 aa23.93■■□□□ 1.42
ITM2C-210ENST00000620962 CHST13Q8NET6 341 aa23.93■■□□□ 1.42
ITM2C-210ENST00000620962 KIFC2Q96AC6 838 aa23.93■■□□□ 1.42
ITM2C-210ENST00000620962 RNPC3Q96LT9 517 aaKnown RBP23.93■■□□□ 1.42
ITM2C-210ENST00000620962 COL25A1Q9BXS0 654 aaPredicted RBP23.93■■□□□ 1.42
ITM2C-210ENST00000620962 RAVER2Q9HCJ3 691 aaKnown RBP23.93■■□□□ 1.42
ITM2C-210ENST00000620962 TMEM39AQ9NV64 488 aa23.93■■□□□ 1.42
ITM2C-210ENST00000620962 DCDC2CA8MYV0 355 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 PATL2C9JE40 543 aaKnown RBP23.92■■□□□ 1.42
ITM2C-210ENST00000620962 M0R2C6 588 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 PRDM1O75626 825 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 FDX1P10109 184 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 FAAP100Q0VG06 881 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 ACVR2BQ13705 512 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 KCNA10Q16322 511 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 IFNL3Q8IZI9 196 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 TTYH1Q9H313 450 aaPredicted RBP23.92■■□□□ 1.42
ITM2C-210ENST00000620962 ABHD16BQ9H3Z7 469 aa23.92■■□□□ 1.42
ITM2C-210ENST00000620962 ZHX1Q9UKY1 873 aaPredicted RBP23.92■■□□□ 1.42
ITM2C-210ENST00000620962 ELP1O95163 1332 aa23.91■■□□□ 1.42
ITM2C-210ENST00000620962 MROH7Q68CQ1 1323 aa23.91■■□□□ 1.42
ITM2C-210ENST00000620962 APPP05067 770 aa23.91■■□□□ 1.42
ITM2C-210ENST00000620962 EPHB4P54760 987 aa23.91■■□□□ 1.42
ITM2C-210ENST00000620962 FPGSQ05932 587 aa23.91■■□□□ 1.42
ITM2C-210ENST00000620962 ANKRD35Q8N283 1001 aa23.91■■□□□ 1.42
ITM2C-210ENST00000620962 NEDD1Q8NHV4 660 aa23.91■■□□□ 1.42
ITM2C-210ENST00000620962 FGD4Q96M96 766 aa23.91■■□□□ 1.42
ITM2C-210ENST00000620962 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.91■■□□□ 1.42
ITM2C-210ENST00000620962 TTC41PQ6P2S7 1318 aa23.9■■□□□ 1.42
ITM2C-210ENST00000620962 PCSK9Q8NBP7 692 aaKnown RBP23.9■■□□□ 1.42
ITM2C-210ENST00000620962 MAFAQ8NHW3 353 aaPredicted RBP23.9■■□□□ 1.42
ITM2C-210ENST00000620962 NACAP1Q9BZK3 213 aa23.9■■□□□ 1.42
ITM2C-210ENST00000620962 UPF3AQ9H1J1 476 aaKnown RBP23.9■■□□□ 1.42
ITM2C-210ENST00000620962 MYADML2A6NDP7 307 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms