RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 ANKLE1Q8NAG6 615 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 GOPCQ9HD26 462 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 ADCY6O43306 1168 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 STRNO43815 780 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 EDNRBP24530 442 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 C1orf53Q5VUE5 145 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 RGS22Q8NE09 1264 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 UNC93B1Q9H1C4 597 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 UPF3AQ9H1J1 476 aaKnown RBP6.74□□□□□ -1.33
FMR1-217ENST00000620828 SH2D4AQ9H788 454 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 ZSWIM5Q9P217 1185 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 GBF1Q92538 1859 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 PFASO15067 1338 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 HMGCRP04035 888 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 INHAP05111 366 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 EN2P19622 333 aaPredicted RBP6.74□□□□□ -1.33
FMR1-217ENST00000620828 IRX6P78412 446 aaPredicted RBP6.74□□□□□ -1.33
FMR1-217ENST00000620828 FAM133AQ8N9E0 248 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 NAPBQ9H115 298 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 MAD2L2Q9UI95 211 aa6.74□□□□□ -1.33
FMR1-217ENST00000620828 SYNGAP1Q96PV0 1343 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 PALM3A6NDB9 673 aaPredicted RBP6.73□□□□□ -1.33
FMR1-217ENST00000620828 PRDM1O75626 825 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 FDX1P10109 184 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 MAML3Q96JK9 1138 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 SLF1Q9BQI6 1058 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 NACAP1Q9BZK3 213 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 ADCY3O60266 1144 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 PPP1R11O60927 126 aaPredicted RBP6.73□□□□□ -1.33
FMR1-217ENST00000620828 SGPL1O95470 568 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 SLC25A27O95847 323 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 EVCP57679 992 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 PDE4BQ07343 736 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 ZNF543Q08ER8 600 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 NUP88Q99567 741 aaPredicted RBP6.73□□□□□ -1.33
FMR1-217ENST00000620828 SENP2Q9HC62 589 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 ATG2AQ2TAZ0 1938 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 SNAI1O95863 264 aaPredicted RBP6.73□□□□□ -1.33
FMR1-217ENST00000620828 FUT2Q10981 343 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 CWC27Q6UX04 472 aaKnown RBP6.73□□□□□ -1.33
FMR1-217ENST00000620828 RPTORQ8N122 1335 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 LOC102724159A0A0B4J2E5 919 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 ERCC3P19447 782 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 HOXD10P28358 340 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 COPB2P35606 906 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 TDO2P48775 406 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 TROAPQ12815 778 aa6.73□□□□□ -1.33
FMR1-217ENST00000620828 PWP2Q15269 919 aaKnown RBP6.73□□□□□ -1.33
FMR1-217ENST00000620828 TOP1P11387 765 aaKnown RBP6.72□□□□□ -1.33
FMR1-217ENST00000620828 MFAP1P55081 439 aaKnown RBP6.72□□□□□ -1.33
FMR1-217ENST00000620828 ARHGEF6Q15052 776 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 PPP4R3BQ5MIZ7 849 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 PRPF38AQ8NAV1 312 aaKnown RBP6.72□□□□□ -1.33
FMR1-217ENST00000620828 ZNF287Q9HBT7 754 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 CLIP2Q9UDT6 1046 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 ELNP15502 786 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 CCND3P30281 292 aaPredicted RBP6.72□□□□□ -1.33
FMR1-217ENST00000620828 KLHDC9Q8NEP7 349 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 RIOX1Q9H6W3 641 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 LY9Q9HBG7 655 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 PRR12Q9ULL5 1215 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 MINDY4BA8MYZ0 360 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 E7EWF7 191 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 TKFCQ3LXA3 575 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 FAM160B2Q86V87 743 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 ZSCAN10Q96SZ4 725 aaPredicted RBP6.72□□□□□ -1.33
FMR1-217ENST00000620828 COL4A6Q14031 1691 aa6.72□□□□□ -1.33
FMR1-217ENST00000620828 SOWAHBA6NEL2 793 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 ICAM1P05362 532 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 BMP3P12645 472 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 CST5P28325 142 aaPredicted RBP6.71□□□□□ -1.33
FMR1-217ENST00000620828 SMARCA1P28370 1054 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 ADORA2AP29274 412 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 RGS2P41220 211 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.71□□□□□ -1.33
FMR1-217ENST00000620828 CYTH3O43739 400 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 ADAMTS4O75173 837 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 SOX10P56693 466 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 IRX3P78415 501 aaPredicted RBP6.71□□□□□ -1.33
FMR1-217ENST00000620828 SPICE1Q8N0Z3 855 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 SLC43A3Q8NBI5 491 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 CHST13Q8NET6 341 aa6.71□□□□□ -1.33
FMR1-217ENST00000620828 MYH7BA7E2Y1 1941 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 TNPO2O14787 897 aaKnown RBP6.71□□□□□ -1.34
FMR1-217ENST00000620828 KIF22Q14807 665 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 GRM4Q14833 912 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 SLC9C1Q4G0N8 1177 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 SLFN13Q68D06 897 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 LRRC47Q8N1G4 583 aaKnown RBP6.71□□□□□ -1.34
FMR1-217ENST00000620828 SZT2Q5T011 3432 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 SLC27A2O14975 620 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 MUM1L1Q5H9M0 696 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 TTBK2Q6IQ55 1244 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 TAPT1Q6NXT6 567 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 SGMS1Q86VZ5 419 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 NUDT12Q9BQG2 462 aa6.71□□□□□ -1.34
FMR1-217ENST00000620828 FAM217BQ9NTX9 383 aaPredicted RBP6.71□□□□□ -1.34
FMR1-217ENST00000620828 GNEQ9Y223 722 aaKnown RBP6.71□□□□□ -1.34
FMR1-217ENST00000620828 SPTBN5Q9NRC6 3674 aaKnown RBP6.71□□□□□ -1.34
FMR1-217ENST00000620828 TSPY3P0CV98 308 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms