RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 AFG3L2Q9Y4W6 797 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 CSADQ9Y600 493 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 TRPM7Q96QT4 1865 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 PTPRFP10586 1907 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 KLRF2D3W0D1 207 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 CYTH3O43739 400 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 FMNL1O95466 1100 aaPredicted RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 ATP2B2Q01814 1243 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 PPATQ06203 517 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 FMR1Q06787 632 aaKnown RBP eCLIP8.69□□□□□ -1.02
VPS45-213ENST00000618148 CST9Q5W186 159 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 SLFN13Q68D06 897 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 USP17L2Q6R6M4 530 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 CCDC84Q86UT8 332 aaPredicted RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 ERO1BQ86YB8 467 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 CCDC144CPQ8IYA2 1237 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 RBM46Q8TBY0 533 aaKnown RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 SPOCK2Q92563 424 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 MTMR8Q96EF0 704 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 RIOX1Q9H6W3 641 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 GBA2Q9HCG7 927 aaPredicted RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 NAP1L2Q9ULW6 460 aaPredicted RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 KCNH4Q9UQ05 1017 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 SMC3Q9UQE7 1217 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 ZHX2Q9Y6X8 837 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 LOC285556D6RIA3 1793 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 C19orf81C9J6K1 198 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 CXCL11O14625 94 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 PRPF3O43395 683 aaKnown RBP8.68□□□□□ -1.02
VPS45-213ENST00000618148 PDCP20941 246 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 GJB2P29033 226 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 SLC1A4P43007 532 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 USP14P54578 494 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 PLCB2Q00722 1185 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 PPIL2Q13356 520 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 ARSIQ5FYB1 569 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 MOB2Q70IA6 237 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 IFNLR1Q8IU57 520 aaPredicted RBP8.68□□□□□ -1.02
VPS45-213ENST00000618148 FAM177A1Q8N128 213 aaPredicted RBP8.68□□□□□ -1.02
VPS45-213ENST00000618148 SMC1BQ8NDV3 1235 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 CLMNQ96JQ2 1002 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 EMILIN3Q9NT22 766 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 PLA2G2EQ9NZK7 142 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 KIF3AQ9Y496 699 aa8.68□□□□□ -1.02
VPS45-213ENST00000618148 WDR46O15213 610 aaKnown RBP8.67□□□□□ -1.02
VPS45-213ENST00000618148 TOMM70O94826 608 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 CELF2O95319 508 aaKnown RBP8.67□□□□□ -1.02
VPS45-213ENST00000618148 DEXIO95424 95 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 BMP3P12645 472 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 SPP2Q13103 211 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 MTMR2Q13614 643 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 PRKG1Q13976 671 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 PKN1Q16512 942 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 TRIM22Q8IYM9 498 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 PHKBQ93100 1093 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 FEZ1Q99689 392 aa8.67□□□□□ -1.02
VPS45-213ENST00000618148 ORC3Q9UBD5 711 aaPredicted RBP8.67□□□□□ -1.02
VPS45-213ENST00000618148 A0A0G2JLL6 359 aaPredicted RBP8.66□□□□□ -1.02
VPS45-213ENST00000618148 UBE2Q2LH0YL09 131 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 GOLGA8HP0CJ92 632 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 VCAM1P19320 739 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 SYT1P21579 422 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 SSRP1Q08945 709 aaKnown RBP8.66□□□□□ -1.02
VPS45-213ENST00000618148 PRRT2Q7Z6L0 340 aaPredicted RBP8.66□□□□□ -1.02
VPS45-213ENST00000618148 CMTR1Q8N1G2 835 aaKnown RBP8.66□□□□□ -1.02
VPS45-213ENST00000618148 C2orf69Q8N8R5 385 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 ZNF784Q8NCA9 323 aaPredicted RBP8.66□□□□□ -1.02
VPS45-213ENST00000618148 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 WASF1Q92558 559 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 ELP3Q9H9T3 547 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 FRMPD2Q68DX3 1309 aaPredicted RBP8.66□□□□□ -1.02
VPS45-213ENST00000618148 PARP14Q460N5 1801 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 RLFQ13129 1914 aa8.66□□□□□ -1.02
VPS45-213ENST00000618148 TRIM75PA6NK02 468 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 hCG_1984214I3L0E3 225 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 IRF6O14896 467 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 BRD1O95696 1058 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 GJA5P36382 358 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 STAT2P52630 851 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 FSTL1Q12841 308 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 MOGSQ13724 837 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 TTLL12Q14166 644 aaPredicted RBP8.65□□□□□ -1.02
VPS45-213ENST00000618148 PFKFB3Q16875 520 aaPredicted RBP8.65□□□□□ -1.02
VPS45-213ENST00000618148 CCDC96Q2M329 555 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 FAM83BQ5T0W9 1011 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 KCTD1Q719H9 257 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 FAM160B2Q86V87 743 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 SPICE1Q8N0Z3 855 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 ZNF713Q8N859 430 aaPredicted RBP8.65□□□□□ -1.02
VPS45-213ENST00000618148 PROCA1Q8NCQ7 364 aaPredicted RBP8.65□□□□□ -1.02
VPS45-213ENST00000618148 FBXO18Q8NFZ0 1043 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 OPTNQ96CV9 577 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 DDX11Q96FC9 970 aa8.65□□□□□ -1.02
VPS45-213ENST00000618148 NUP88Q99567 741 aaPredicted RBP8.65□□□□□ -1.02
VPS45-213ENST00000618148 SLC26A6Q9BXS9 759 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms