RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 OXR1Q8N573 874 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 FAM168AQ92567 244 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 KIRREL1Q96J84 757 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 C8orf37Q96NL8 207 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 KLHL25Q9H0H3 589 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 GBP3Q9H0R5 595 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 ACTR10Q9NZ32 417 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 WHRNQ9P202 907 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 PCDHB10Q9UN67 800 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 CARMIL2Q6F5E8 1435 aa8.11□□□□□ -1.11
SCAMP1-205ENST00000614488 TMEM82A0PJX8 343 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 FITM1A5D6W6 292 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 CHRNEQ04844 493 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 NR0B2Q15466 257 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 KCNMB1Q16558 191 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 HEATR6Q6AI08 1181 aaKnown RBP8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 CRTC3Q6UUV7 619 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 WAPLQ7Z5K2 1190 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 LILRA2Q8N149 483 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 ANKS4BQ8N8V4 417 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 LINC01599Q8WXQ3 324 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 FMNL2Q96PY5 1086 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 G6PC3Q9BUM1 346 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 ZNF408Q9H9D4 720 aa8.1□□□□□ -1.11
SCAMP1-205ENST00000614488 MEIS1O00470 390 aa8.09□□□□□ -1.11
SCAMP1-205ENST00000614488 RPL10P27635 214 aaKnown RBP8.09□□□□□ -1.11
SCAMP1-205ENST00000614488 NCAPHQ15003 741 aa8.09□□□□□ -1.11
SCAMP1-205ENST00000614488 NAALADL2Q58DX5 795 aa8.09□□□□□ -1.11
SCAMP1-205ENST00000614488 FYB2Q5VWT5 728 aa8.09□□□□□ -1.11
SCAMP1-205ENST00000614488 CWF19L1Q69YN2 538 aaKnown RBP8.09□□□□□ -1.11
SCAMP1-205ENST00000614488 SF3B6Q9Y3B4 125 aaKnown RBP8.09□□□□□ -1.11
SCAMP1-205ENST00000614488 RNF114Q9Y508 228 aa8.09□□□□□ -1.11
SCAMP1-205ENST00000614488 H0Y8X5 98 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 EPHX1P07099 455 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 GLI1P08151 1106 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 NAT2P11245 290 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 VAV1P15498 845 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 ETFBP38117 255 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 ZNF143P52747 638 aaPredicted RBP8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 KIAA1211LQ6NV74 962 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 SPPL2CQ8IUH8 684 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 FIBCD1Q8N539 461 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 MYLIPQ8WY64 445 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 MAP6Q96JE9 813 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 FCRL2Q96LA5 508 aaPredicted RBP8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 SP110Q9HB58 689 aa8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 DIS3Q9Y2L1 958 aaKnown RBP8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
SCAMP1-205ENST00000614488 FKTNO75072 461 aa8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 KIR2DL1P43626 348 aaPredicted RBP8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 KIR2DL2P43627 348 aaPredicted RBP8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 ERVFC1P60507 584 aa8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 KRTAP1-3Q8IUG1 177 aa8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 ABHD4Q8TB40 342 aa8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 BRF1Q92994 677 aa8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 SUSD2Q9UGT4 822 aa8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 EBF1Q9UH73 591 aa8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 ZMYM5Q9UJ78 669 aa8.07□□□□□ -1.12
SCAMP1-205ENST00000614488 ANKRD34BA5PLL1 514 aa8.06□□□□□ -1.12
SCAMP1-205ENST00000614488 PPM1BO75688 479 aa8.06□□□□□ -1.12
SCAMP1-205ENST00000614488 TMEM67Q5HYA8 995 aa8.06□□□□□ -1.12
SCAMP1-205ENST00000614488 KRTAP4-12Q9BQ66 201 aa8.06□□□□□ -1.12
SCAMP1-205ENST00000614488 NOL6Q9H6R4 1146 aaKnown RBP8.06□□□□□ -1.12
SCAMP1-205ENST00000614488 FXNQ16595 210 aa8.05□□□□□ -1.12
SCAMP1-205ENST00000614488 RTP2Q5QGT7 225 aa8.05□□□□□ -1.12
SCAMP1-205ENST00000614488 LARP1BQ659C4 914 aaKnown RBP8.05□□□□□ -1.12
SCAMP1-205ENST00000614488 RCC1LQ96I51 464 aaKnown RBP8.05□□□□□ -1.12
SCAMP1-205ENST00000614488 SLC12A9Q9BXP2 914 aa8.05□□□□□ -1.12
SCAMP1-205ENST00000614488 ERVK13-1Q9NX77 482 aa8.05□□□□□ -1.12
SCAMP1-205ENST00000614488 FAM53CQ9NYF3 392 aa8.05□□□□□ -1.12
SCAMP1-205ENST00000614488 TNFRSF10DQ9UBN6 386 aa8.05□□□□□ -1.12
SCAMP1-205ENST00000614488 ZNF503-AS2A6NEH8 195 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 NOP2P46087 812 aaKnown RBP8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 POU4F1Q01851 419 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 SNX17Q15036 470 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 ZPBP2Q6X784 338 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 ADAT2Q7Z6V5 191 aaKnown RBP8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 FAM178BQ8IXR5 827 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 ADCY4Q8NFM4 1077 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 HHIPL1Q96JK4 782 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 FGD4Q96M96 766 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 CDADC1Q9BWV3 514 aa8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 CGGBP1Q9UFW8 167 aaPredicted RBP8.04□□□□□ -1.12
SCAMP1-205ENST00000614488 NRDCO43847 1150 aa8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 USP2O75604 605 aaPredicted RBP8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 GRB10Q13322 594 aa8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 C6orf15Q6UXA7 325 aaPredicted RBP8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 ARHGEF39Q8N4T4 335 aa8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 ZNF513Q8N8E2 541 aaPredicted RBP8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 ZDHHC15Q96MV8 337 aa8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 CWC22Q9HCG8 908 aaKnown RBP8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 AP5S1Q9NUS5 200 aa8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 R3HCC1Q9Y3T6 440 aaKnown RBP8.03□□□□□ -1.12
SCAMP1-205ENST00000614488 FADS2P1A8MWK0 482 aa8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 GSTM1P09488 218 aa8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 TRHRP34981 398 aaPredicted RBP8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 TXKP42681 527 aa8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 TIGD5Q53EQ6 642 aa8.02□□□□□ -1.13
SCAMP1-205ENST00000614488 CRACR2BQ8N4Y2 399 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms