RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 DHX32Q7L7V1 743 aaKnown RBP16.16■□□□□ 0.18
SNRPA-208ENST00000600456 RASGRP2Q7LDG7 609 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 SOCS4Q8WXH5 440 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 MOV10L1Q9BXT6 1211 aaKnown RBP16.16■□□□□ 0.18
SNRPA-208ENST00000600456 TEX13BQ9BXU2 312 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 PORCNQ9H237 461 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 ZNF214Q9UL59 606 aaPredicted RBP16.16■□□□□ 0.18
SNRPA-208ENST00000600456 PRR12Q9ULL5 1215 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
SNRPA-208ENST00000600456 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 PARP14Q460N5 1801 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 FRMPD2Q68DX3 1309 aaPredicted RBP16.16■□□□□ 0.18
SNRPA-208ENST00000600456 SH2B2O14492 632 aaPredicted RBP16.15■□□□□ 0.18
SNRPA-208ENST00000600456 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
SNRPA-208ENST00000600456 PSMA5P28066 241 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 STAT3P40763 770 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 LIFRP42702 1097 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 PLS1Q14651 629 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 ADCK5Q3MIX3 580 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 GPR142Q7Z601 462 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 PLEKHH3Q7Z736 793 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 CATIPQ7Z7H3 387 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 RIOX2Q8IUF8 465 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 LY9Q9HBG7 655 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 CWC22Q9HCG8 908 aaKnown RBP16.15■□□□□ 0.18
SNRPA-208ENST00000600456 GPCPD1Q9NPB8 672 aa16.15■□□□□ 0.18
SNRPA-208ENST00000600456 PARP1P09874 1014 aaKnown RBP16.14■□□□□ 0.17
SNRPA-208ENST00000600456 EXOSC10Q01780 885 aaKnown RBP16.14■□□□□ 0.17
SNRPA-208ENST00000600456 PRKCZQ05513 592 aa16.14■□□□□ 0.17
SNRPA-208ENST00000600456 IRF5Q13568 498 aa16.14■□□□□ 0.17
SNRPA-208ENST00000600456 SYDE2Q5VT97 1194 aa16.14■□□□□ 0.17
SNRPA-208ENST00000600456 TTBK2Q6IQ55 1244 aa16.14■□□□□ 0.17
SNRPA-208ENST00000600456 JAKMIP1Q96N16 626 aaKnown RBP16.14■□□□□ 0.17
SNRPA-208ENST00000600456 MAP3K14Q99558 947 aa16.14■□□□□ 0.17
SNRPA-208ENST00000600456 PNMA2Q9UL42 364 aa16.14■□□□□ 0.17
SNRPA-208ENST00000600456 IVNS1ABPQ9Y6Y0 642 aa16.14■□□□□ 0.17
SNRPA-208ENST00000600456 SLC15A5A6NIM6 579 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 STRNO43815 780 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 DDAH1O94760 285 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 ERCC3P19447 782 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 FLT3LGP49771 235 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 TROAPQ12815 778 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 SNRNP48Q6IEG0 339 aaKnown RBP16.13■□□□□ 0.17
SNRPA-208ENST00000600456 BLOC1S2Q6QNY1 142 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 ABRAQ8N0Z2 381 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 RAET1EQ8TD07 263 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 NUDT12Q9BQG2 462 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
SNRPA-208ENST00000600456 SENP2Q9HC62 589 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
SNRPA-208ENST00000600456 ZSWIM8A7E2V4 1837 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 GOLGA8HP0CJ92 632 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 CALM1P0DP23 149 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 CALM2P0DP24 149 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 CALM3P0DP25 149 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 PTPREP23469 700 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 SLC16A2P36021 539 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 ANAPC15P60006 121 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 COL9A3Q14050 684 aaPredicted RBP16.12■□□□□ 0.17
SNRPA-208ENST00000600456 GRM4Q14833 912 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 MORN1Q5T089 497 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 WDR78Q5VTH9 848 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 NFXL1Q6ZNB6 911 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 NCAPG2Q86XI2 1143 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 ZNF654Q8IZM8 581 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 PXYLP1Q8TE99 480 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 GJD2Q9UKL4 321 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 GABRQQ9UN88 632 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 MGAMO43451 1857 aa16.12■□□□□ 0.17
SNRPA-208ENST00000600456 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
SNRPA-208ENST00000600456 XRCC5P13010 732 aaKnown RBP16.11■□□□□ 0.17
SNRPA-208ENST00000600456 KIF5BP33176 963 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 RGS2P41220 211 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 GRB14Q14449 540 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 TKFCQ3LXA3 575 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 CPXCR1Q8N123 301 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 FBXL16Q8N461 479 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 SLAIN1Q8ND83 568 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 USP6NLQ92738 828 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 ABHD8Q96I13 439 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
SNRPA-208ENST00000600456 GPHNQ9NQX3 736 aaPredicted RBP16.11■□□□□ 0.17
SNRPA-208ENST00000600456 FBXO40Q9UH90 709 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 MAD2L2Q9UI95 211 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 SLC12A7Q9Y666 1083 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 ZNF536O15090 1300 aa16.11■□□□□ 0.17
SNRPA-208ENST00000600456 KLRF2D3W0D1 207 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 ICAM1P05362 532 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 FCER1AP12319 257 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 RPS6KB1P23443 525 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 FGD1P98174 961 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 MAP2K5Q13163 448 aa16.1■□□□□ 0.17
SNRPA-208ENST00000600456 SLC9C1Q4G0N8 1177 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms