RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 AKNAD1Q5T1N1 836 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 RCSD1Q6JBY9 416 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 MFSD6Q6ZSS7 791 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 FAM160B2Q86V87 743 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 STAG1Q8WVM7 1258 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 KIFC2Q96AC6 838 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 TTC14Q96N46 770 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 MMP19Q99542 508 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 RNF41Q9H4P4 317 aaPredicted RBP12.44□□□□□ -0.42
CCDC9-203ENST00000596938 NR2E3Q9Y5X4 410 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 TMEM232C9JQI7 657 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 H0YGN5 161 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 ZNF213O14771 459 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 MCCP23508 829 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 SLC1A4P43007 532 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 STAT2P52630 851 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 ZNF792Q3KQV3 632 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 TTC22Q5TAA0 569 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC9-203ENST00000596938 MAML3Q96JK9 1138 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 DSCC1Q9BVC3 393 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 TOMM22Q9NS69 142 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
CCDC9-203ENST00000596938 RIPK3Q9Y572 518 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
CCDC9-203ENST00000596938 RLFQ13129 1914 aa12.43□□□□□ -0.42
CCDC9-203ENST00000596938 GREB1LQ9C091 1923 aaPredicted RBP12.43□□□□□ -0.42
CCDC9-203ENST00000596938 TOP1P11387 765 aaKnown RBP12.42□□□□□ -0.42
CCDC9-203ENST00000596938 CYBAP13498 195 aa12.42□□□□□ -0.42
CCDC9-203ENST00000596938 GSPT1P15170 499 aaKnown RBP12.42□□□□□ -0.42
CCDC9-203ENST00000596938 HAND2P61296 217 aa12.42□□□□□ -0.42
CCDC9-203ENST00000596938 RRP12Q5JTH9 1297 aaKnown RBP12.42□□□□□ -0.42
CCDC9-203ENST00000596938 SNRNP48Q6IEG0 339 aaKnown RBP12.42□□□□□ -0.42
CCDC9-203ENST00000596938 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
CCDC9-203ENST00000596938 TRPV1Q8NER1 839 aa12.42□□□□□ -0.42
CCDC9-203ENST00000596938 DIS3LQ8TF46 1054 aaKnown RBP12.42□□□□□ -0.42
CCDC9-203ENST00000596938 RAVER2Q9HCJ3 691 aaKnown RBP12.42□□□□□ -0.42
CCDC9-203ENST00000596938 FBXO40Q9UH90 709 aa12.42□□□□□ -0.42
CCDC9-203ENST00000596938 NRBP1Q9UHY1 535 aa12.42□□□□□ -0.42
CCDC9-203ENST00000596938 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
CCDC9-203ENST00000596938 DNAJC25-GNG10A0A024R161 153 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 SEPT4O43236 478 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 EVI5O60447 810 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 PGK2P07205 417 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 COL6A1P12109 1028 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 CNGA1P29973 690 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 TBC1D10CQ8IV04 446 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 MSL3Q8N5Y2 521 aaKnown RBP12.41□□□□□ -0.42
CCDC9-203ENST00000596938 CHST13Q8NET6 341 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 DCAF4Q8WV16 495 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 ESR2Q92731 530 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 DDX11Q96FC9 970 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 TMEM47Q9BQJ4 181 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 C11orf49Q9H6J7 331 aa12.41□□□□□ -0.42
CCDC9-203ENST00000596938 A0A0G2JMZ2 1700 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 IMMTQ16891 758 aaKnown RBP12.4□□□□□ -0.42
CCDC9-203ENST00000596938 TKFCQ3LXA3 575 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 CCDC178Q5BJE1 867 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 BTNL9Q6UXG8 535 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 KCTD1Q719H9 257 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
CCDC9-203ENST00000596938 DGKHQ86XP1 1220 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 ARRDC4Q8NCT1 418 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 TINF2Q9BSI4 451 aa12.4□□□□□ -0.42
CCDC9-203ENST00000596938 CHMLP26374 656 aa12.39□□□□□ -0.43
CCDC9-203ENST00000596938 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
CCDC9-203ENST00000596938 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
CCDC9-203ENST00000596938 HABP4Q5JVS0 413 aaKnown RBP12.39□□□□□ -0.43
CCDC9-203ENST00000596938 PRAMEF19Q5SWL8 479 aa12.39□□□□□ -0.43
CCDC9-203ENST00000596938 MAMDC4Q6UXC1 1216 aa12.39□□□□□ -0.43
CCDC9-203ENST00000596938 ANKS1AQ92625 1134 aa12.39□□□□□ -0.43
CCDC9-203ENST00000596938 PRR12Q9ULL5 1215 aa12.39□□□□□ -0.43
CCDC9-203ENST00000596938 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
CCDC9-203ENST00000596938 PFASO15067 1338 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 ZNF536O15090 1300 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 RAD50Q92878 1312 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 DNM1LO00429 736 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 ANKRD35Q8N283 1001 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 IL25Q9H293 177 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 CNNM2Q9H8M5 875 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 ZSWIM5Q9P217 1185 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 COLQQ9Y215 455 aaPredicted RBP12.38□□□□□ -0.43
CCDC9-203ENST00000596938 MYH8P13535 1937 aa12.38□□□□□ -0.43
CCDC9-203ENST00000596938 NEDD4P46934 1319 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 ZNF236Q9UL36 1845 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 RANBP2P49792 3224 aaKnown RBP12.37□□□□□ -0.43
CCDC9-203ENST00000596938 KDM4AO75164 1064 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 SLC34A2O95436 690 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 SNAI1O95863 264 aaPredicted RBP12.37□□□□□ -0.43
CCDC9-203ENST00000596938 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
CCDC9-203ENST00000596938 PDHBP11177 359 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 CCDC96Q2M329 555 aa12.37□□□□□ -0.43
CCDC9-203ENST00000596938 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms