RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 GIMAP6Q6P9H5 292 aa12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 PRPF38AQ8NAV1 312 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 APPBP2Q92624 585 aa12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 OSBP2Q969R2 916 aa12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 TRIM43Q96BQ3 446 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 GUCD1Q96NT3 240 aa12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 TEX13BQ9BXU2 312 aa12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 DNAH12Q6ZR08 3092 aa12.62□□□□□ -0.39
CHMP2A-202ENST00000596708 GPAA1O43292 621 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 PQBP1O60828 265 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 PRDM1O75626 825 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 NDUFB10O96000 172 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 CLTBP09497 229 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 RAG1P15918 1043 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 TSHZ3Q63HK5 1081 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 KIFC2Q96AC6 838 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 LENG1Q96BZ8 264 aaPredicted RBP12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 ZHX1Q9UKY1 873 aaPredicted RBP12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 FAM184BQ9ULE4 1060 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 RIPK3Q9Y572 518 aa12.61□□□□□ -0.39
CHMP2A-202ENST00000596708 A0A1W2PQ45 241 aaPredicted RBP12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 A0A1W2PQY0 241 aa12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 ZFYP08048 801 aaPredicted RBP12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 GNAT2P19087 354 aa12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 LRRFIP1Q32MZ4 808 aaKnown RBP12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 MSL3Q8N5Y2 521 aaKnown RBP12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 SEMA6BQ9H3T3 888 aa12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 DCTPP1Q9H773 170 aa12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 RAVER2Q9HCJ3 691 aaKnown RBP12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 STARD7Q9NQZ5 370 aa12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 TMEM39AQ9NV64 488 aa12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
CHMP2A-202ENST00000596708 ROBO3Q96MS0 1386 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 DCDC2CA8MYV0 355 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 M0R2C6 588 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 ADAMTS4O75173 837 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 SNAI1O95863 264 aaPredicted RBP12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 ITGB8P26012 769 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 KCNA10Q16322 511 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 IFNL3Q8IZI9 196 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 MKL1Q969V6 931 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 VTI1AQ96AJ9 217 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 CEP95Q96GE4 821 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 RNPC3Q96LT9 517 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 CDX2Q99626 313 aaPredicted RBP12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 TSEN34Q9BSV6 310 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 NACAP1Q9BZK3 213 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 FEM1BQ9UK73 627 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 SYNGAP1Q96PV0 1343 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 SYNRGQ9UMZ2 1314 aa12.59□□□□□ -0.39
CHMP2A-202ENST00000596708 IGKV6D-41A0A0C4DH26 115 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 MOXD2PA6NHM9 499 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 ATP2A1O14983 1001 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 KIAA0355O15063 1070 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 TTLL1O95922 423 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 TSPY3P0CV98 308 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 TSPY8P0CW00 308 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 ACLYP53396 1101 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 SMAD3P84022 425 aaKnown RBP12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 PDE4BQ07343 736 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 ACVR2BQ13705 512 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 MAMDC4Q6UXC1 1216 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 SPC25Q9HBM1 224 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 MTMR4Q9NYA4 1195 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 FBXO40Q9UH90 709 aa12.58□□□□□ -0.4
CHMP2A-202ENST00000596708 DNAJC25-GNG10A0A024R161 153 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 ERC2O15083 957 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 DUSP11O75319 330 aaKnown RBP12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 SLC3A2P08195 630 aaKnown RBP12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 C6orf222P0C671 652 aaPredicted RBP12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 BMP3P12645 472 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 FPGSQ05932 587 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 IKQ13123 557 aaPredicted RBP12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 KLHDC9Q8NEP7 349 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 CHST13Q8NET6 341 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 CHMP4CQ96CF2 233 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 GLT1D1Q96MS3 346 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 TOX2Q96NM4 488 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 SEC62Q99442 399 aaKnown RBP12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 ABHD16BQ9H3Z7 469 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 SLC38A10Q9HBR0 1119 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 GBF1Q92538 1859 aa12.57□□□□□ -0.4
CHMP2A-202ENST00000596708 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 TMEM232C9JQI7 657 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 EPHB4P54760 987 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 TFAP4Q01664 338 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 FAAP100Q0VG06 881 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 ARMCX2Q7L311 632 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms