RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SLC38A10Q9HBR0 1119 aa30.17■■■□□ 2.42
TRIM28-204ENST00000594806 CWC22Q9HCG8 908 aaKnown RBP30.17■■■□□ 2.42
TRIM28-204ENST00000594806 WDR19Q8NEZ3 1342 aa30.17■■■□□ 2.42
TRIM28-204ENST00000594806 PRC1O43663 620 aa30.16■■■□□ 2.42
TRIM28-204ENST00000594806 IRF5Q13568 498 aa30.16■■■□□ 2.42
TRIM28-204ENST00000594806 PLS1Q14651 629 aa30.16■■■□□ 2.42
TRIM28-204ENST00000594806 TMEM67Q5HYA8 995 aa30.16■■■□□ 2.42
TRIM28-204ENST00000594806 GPR142Q7Z601 462 aa30.16■■■□□ 2.42
TRIM28-204ENST00000594806 PLEKHH3Q7Z736 793 aa30.16■■■□□ 2.42
TRIM28-204ENST00000594806 RASEFQ8IZ41 740 aa30.16■■■□□ 2.42
TRIM28-204ENST00000594806 SOCS4Q8WXH5 440 aa30.16■■■□□ 2.42
TRIM28-204ENST00000594806 MOV10L1Q9BXT6 1211 aaKnown RBP30.16■■■□□ 2.42
TRIM28-204ENST00000594806 ECM2O94769 699 aaPredicted RBP30.15■■■□□ 2.42
TRIM28-204ENST00000594806 STAT3P40763 770 aa30.15■■■□□ 2.42
TRIM28-204ENST00000594806 ASPRV1Q53RT3 343 aa30.15■■■□□ 2.42
TRIM28-204ENST00000594806 RIOX2Q8IUF8 465 aa30.15■■■□□ 2.42
TRIM28-204ENST00000594806 ZNF214Q9UL59 606 aaPredicted RBP30.15■■■□□ 2.42
TRIM28-204ENST00000594806 STRNO43815 780 aa30.14■■■□□ 2.42
TRIM28-204ENST00000594806 PRKCZQ05513 592 aa30.14■■■□□ 2.42
TRIM28-204ENST00000594806 CHST3Q7LGC8 479 aa30.14■■■□□ 2.42
TRIM28-204ENST00000594806 RAET1EQ8TD07 263 aa30.14■■■□□ 2.42
TRIM28-204ENST00000594806 NUDT12Q9BQG2 462 aa30.14■■■□□ 2.42
TRIM28-204ENST00000594806 TEX13BQ9BXU2 312 aa30.14■■■□□ 2.42
TRIM28-204ENST00000594806 GJD2Q9UKL4 321 aa30.14■■■□□ 2.42
TRIM28-204ENST00000594806 IVNS1ABPQ9Y6Y0 642 aa30.14■■■□□ 2.42
TRIM28-204ENST00000594806 FLT3LGP49771 235 aa30.13■■■□□ 2.41
TRIM28-204ENST00000594806 DHX32Q7L7V1 743 aaKnown RBP30.13■■■□□ 2.41
TRIM28-204ENST00000594806 ABHD8Q96I13 439 aa30.13■■■□□ 2.41
TRIM28-204ENST00000594806 PRR12Q9ULL5 1215 aa30.13■■■□□ 2.41
TRIM28-204ENST00000594806 HPS5Q9UPZ3 1129 aa30.13■■■□□ 2.41
TRIM28-204ENST00000594806 PTCH2Q9Y6C5 1203 aa30.13■■■□□ 2.41
TRIM28-204ENST00000594806 PARP1P09874 1014 aaKnown RBP30.12■■■□□ 2.41
TRIM28-204ENST00000594806 ERCC3P19447 782 aa30.12■■■□□ 2.41
TRIM28-204ENST00000594806 LIFRP42702 1097 aa30.12■■■□□ 2.41
TRIM28-204ENST00000594806 GPCPD1Q9NPB8 672 aa30.12■■■□□ 2.41
TRIM28-204ENST00000594806 PNMA2Q9UL42 364 aa30.12■■■□□ 2.41
TRIM28-204ENST00000594806 GABRQQ9UN88 632 aa30.12■■■□□ 2.41
TRIM28-204ENST00000594806 SNX14Q9Y5W7 946 aa30.12■■■□□ 2.41
TRIM28-204ENST00000594806 SLC15A5A6NIM6 579 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 PTPREP23469 700 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 PSMA5P28066 241 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 SYDE2Q5VT97 1194 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 WDR78Q5VTH9 848 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 RASGRP2Q7LDG7 609 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 CATIPQ7Z7H3 387 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 NBPF11Q86T75 865 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 ABRAQ8N0Z2 381 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 PXYLP1Q8TE99 480 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 CHMP4CQ96CF2 233 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 LY9Q9HBG7 655 aa30.11■■■□□ 2.41
TRIM28-204ENST00000594806 FRMPD2Q68DX3 1309 aaPredicted RBP30.11■■■□□ 2.41
TRIM28-204ENST00000594806 ADCK5Q3MIX3 580 aa30.1■■■□□ 2.41
TRIM28-204ENST00000594806 MORN1Q5T089 497 aa30.1■■■□□ 2.41
TRIM28-204ENST00000594806 TTBK2Q6IQ55 1244 aa30.1■■■□□ 2.41
TRIM28-204ENST00000594806 NCAPG2Q86XI2 1143 aa30.1■■■□□ 2.41
TRIM28-204ENST00000594806 SH2B2O14492 632 aaPredicted RBP30.09■■■□□ 2.41
TRIM28-204ENST00000594806 XRCC5P13010 732 aaKnown RBP30.09■■■□□ 2.41
TRIM28-204ENST00000594806 EXOSC10Q01780 885 aaKnown RBP30.09■■■□□ 2.41
TRIM28-204ENST00000594806 SLC9C1Q4G0N8 1177 aa30.09■■■□□ 2.41
TRIM28-204ENST00000594806 SNRNP48Q6IEG0 339 aaKnown RBP30.09■■■□□ 2.41
TRIM28-204ENST00000594806 SLAIN1Q8ND83 568 aa30.09■■■□□ 2.41
TRIM28-204ENST00000594806 MAP3K14Q99558 947 aa30.09■■■□□ 2.41
TRIM28-204ENST00000594806 GTF3C3Q9Y5Q9 886 aa30.09■■■□□ 2.41
TRIM28-204ENST00000594806 PLXNB2O15031 1838 aa30.08■■■□□ 2.41
TRIM28-204ENST00000594806 RGS2P41220 211 aa30.08■■■□□ 2.41
TRIM28-204ENST00000594806 GRB14Q14449 540 aa30.08■■■□□ 2.41
TRIM28-204ENST00000594806 TRMT44Q8IYL2 757 aaKnown RBP30.08■■■□□ 2.41
TRIM28-204ENST00000594806 CPXCR1Q8N123 301 aa30.08■■■□□ 2.41
TRIM28-204ENST00000594806 USP6NLQ92738 828 aa30.08■■■□□ 2.41
TRIM28-204ENST00000594806 ARMC5Q96C12 935 aa30.08■■■□□ 2.41
TRIM28-204ENST00000594806 RANBP17Q9H2T7 1088 aaKnown RBP30.08■■■□□ 2.41
TRIM28-204ENST00000594806 CCDC69A6NI79 296 aa30.07■■■□□ 2.4
TRIM28-204ENST00000594806 DDAH1O94760 285 aa30.07■■■□□ 2.4
TRIM28-204ENST00000594806 GRK4P32298 578 aa30.07■■■□□ 2.4
TRIM28-204ENST00000594806 SLC16A2P36021 539 aa30.07■■■□□ 2.4
TRIM28-204ENST00000594806 TROAPQ12815 778 aa30.07■■■□□ 2.4
TRIM28-204ENST00000594806 TKFCQ3LXA3 575 aa30.07■■■□□ 2.4
TRIM28-204ENST00000594806 JAKMIP1Q96N16 626 aaKnown RBP30.07■■■□□ 2.4
TRIM28-204ENST00000594806 RAVER2Q9HCJ3 691 aaKnown RBP30.07■■■□□ 2.4
TRIM28-204ENST00000594806 FBXO40Q9UH90 709 aa30.07■■■□□ 2.4
TRIM28-204ENST00000594806 ZNF236Q9UL36 1845 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 ADCY3O60266 1144 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 FCER1AP12319 257 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 MAP2K5Q13163 448 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 GRM4Q14833 912 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 BLOC1S2Q6QNY1 142 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 NFXL1Q6ZNB6 911 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.06■■■□□ 2.42e-9■■□□□ 12.1
TRIM28-204ENST00000594806 SGMS1Q86VZ5 419 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 CHST13Q8NET6 341 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 SENP2Q9HC62 589 aa30.06■■■□□ 2.4
TRIM28-204ENST00000594806 ZNFX1Q9P2E3 1918 aaKnown RBP30.06■■■□□ 2.4
TRIM28-204ENST00000594806 PALM3A6NDB9 673 aaPredicted RBP30.05■■■□□ 2.4
TRIM28-204ENST00000594806 GOLGA8HP0CJ92 632 aa30.05■■■□□ 2.4
TRIM28-204ENST00000594806 CALM1P0DP23 149 aa30.05■■■□□ 2.4
TRIM28-204ENST00000594806 CALM2P0DP24 149 aa30.05■■■□□ 2.4
TRIM28-204ENST00000594806 CALM3P0DP25 149 aa30.05■■■□□ 2.4
TRIM28-204ENST00000594806 ZNF654Q8IZM8 581 aa30.05■■■□□ 2.4
TRIM28-204ENST00000594806 SLC5A4Q9NY91 659 aa30.05■■■□□ 2.4
TRIM28-204ENST00000594806 ZNF536O15090 1300 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms