RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CCSER2Q9H7U1 834 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 NEUROD4Q9HD90 331 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 PRDM6Q9NQX0 595 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 CTSHP09668 335 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 TCIRG1Q13488 830 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 SOGA3Q5TF21 947 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 PPP1R42Q7Z4L9 355 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 ZNF438Q7Z4V0 828 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 NLRP10Q86W26 655 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 CCDC74AQ96AQ1 378 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 HSH2DQ96JZ2 352 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 UTP14AQ9BVJ6 771 aaKnown RBP9.67□□□□□ -0.86
VMP1-213ENST00000591877 C12orf49Q9H741 205 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 IFT57Q9NWB7 429 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 COL4A5P29400 1685 aa9.67□□□□□ -0.86
VMP1-213ENST00000591877 A6NHS1 94 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 DDNO94850 711 aaPredicted RBP9.66□□□□□ -0.86
VMP1-213ENST00000591877 VEGFAP15692 232 aaPredicted RBP9.66□□□□□ -0.86
VMP1-213ENST00000591877 SELPP16109 830 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 GNAI1P63096 354 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
VMP1-213ENST00000591877 C16orf71Q8IYS4 520 aaPredicted RBP9.66□□□□□ -0.86
VMP1-213ENST00000591877 C8orf58Q8NAV2 365 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 TP53INP1Q96A56 240 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 CRAMP1Q96RY5 1269 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 ZFYVE28Q9HCC9 887 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 ZNF277Q9NRM2 450 aaPredicted RBP9.66□□□□□ -0.86
VMP1-213ENST00000591877 DBF4Q9UBU7 674 aaPredicted RBP9.66□□□□□ -0.86
VMP1-213ENST00000591877 KCNMB2Q9Y691 235 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 SCN4AP35499 1836 aa9.66□□□□□ -0.86
VMP1-213ENST00000591877 COL4A1P02462 1669 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 ELL2O00472 640 aaPredicted RBP9.65□□□□□ -0.86
VMP1-213ENST00000591877 EGFRP00533 1210 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 HCLS1P14317 486 aaPredicted RBP9.65□□□□□ -0.86
VMP1-213ENST00000591877 HTRA3P83110 453 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 PTPN12Q05209 780 aaKnown RBP9.65□□□□□ -0.86
VMP1-213ENST00000591877 FSTL1Q12841 308 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 SFSWAPQ12872 951 aaKnown RBP9.65□□□□□ -0.86
VMP1-213ENST00000591877 GNL2Q13823 731 aaKnown RBP9.65□□□□□ -0.86
VMP1-213ENST00000591877 TRIP4Q15650 581 aaPredicted RBP9.65□□□□□ -0.86
VMP1-213ENST00000591877 HSP90AB3PQ58FF7 597 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 LRRC69Q6ZNQ3 347 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 RTKN2Q8IZC4 609 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 DNAJC5GQ8N7S2 189 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 PLBD2Q8NHP8 589 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 RPGRQ92834 1020 aaKnown RBP9.65□□□□□ -0.86
VMP1-213ENST00000591877 TNFRSF25Q93038 417 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 ISCA1Q9BUE6 129 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 PHAXQ9H814 394 aaKnown RBP9.65□□□□□ -0.86
VMP1-213ENST00000591877 ELP3Q9H9T3 547 aa9.65□□□□□ -0.86
VMP1-213ENST00000591877 ABCC4O15439 1325 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 RNF123Q5XPI4 1314 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 ZNF541Q9H0D2 1346 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 PHACTR2O75167 634 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 ADH7P40394 386 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 IARSP41252 1262 aaKnown RBP9.64□□□□□ -0.87
VMP1-213ENST00000591877 ST13P50502 369 aaKnown RBP9.64□□□□□ -0.87
VMP1-213ENST00000591877 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 RAB44Q7Z6P3 723 aaPredicted RBP9.64□□□□□ -0.87
VMP1-213ENST00000591877 TXNRD3Q86VQ6 643 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 TSPYL6Q8N831 410 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 RBM17Q96I25 401 aaKnown RBP9.64□□□□□ -0.87
VMP1-213ENST00000591877 PSMD1Q99460 953 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 HYPKQ9NX55 129 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 FAM8A1Q9UBU6 413 aa9.64□□□□□ -0.87
VMP1-213ENST00000591877 TRMT112Q9UI30 125 aaKnown RBP9.64□□□□□ -0.87
VMP1-213ENST00000591877 LRRC37AA6NMS7 1700 aa9.63□□□□□ -0.87
VMP1-213ENST00000591877 FZD9O00144 591 aa9.63□□□□□ -0.87
VMP1-213ENST00000591877 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
VMP1-213ENST00000591877 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
VMP1-213ENST00000591877 TYRO3Q06418 890 aa9.63□□□□□ -0.87
VMP1-213ENST00000591877 SMC1BQ8NDV3 1235 aa9.63□□□□□ -0.87
VMP1-213ENST00000591877 TSR2Q969E8 191 aaKnown RBP9.63□□□□□ -0.87
VMP1-213ENST00000591877 PMEPA1Q969W9 287 aa9.63□□□□□ -0.87
VMP1-213ENST00000591877 ARMC5Q96C12 935 aa9.63□□□□□ -0.87
VMP1-213ENST00000591877 FOXD3Q9UJU5 478 aaPredicted RBP9.63□□□□□ -0.87
VMP1-213ENST00000591877 ADAMTSL1Q8N6G6 1762 aa9.63□□□□□ -0.87
VMP1-213ENST00000591877 LTBP1Q14766 1721 aa9.62□□□□□ -0.87
VMP1-213ENST00000591877 SH3TC1Q8TE82 1336 aa9.62□□□□□ -0.87
VMP1-213ENST00000591877 ANP32CO43423 234 aa9.62□□□□□ -0.87
VMP1-213ENST00000591877 HS2ST1Q7LGA3 356 aa9.62□□□□□ -0.87
VMP1-213ENST00000591877 CMTR1Q8N1G2 835 aaKnown RBP9.62□□□□□ -0.87
VMP1-213ENST00000591877 FAM89AQ96GI7 184 aa9.62□□□□□ -0.87
VMP1-213ENST00000591877 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.62□□□□□ -0.87
VMP1-213ENST00000591877 A0A0A0MRY4 1105 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 MCTP1Q6DN14 999 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 GALNT12Q8IXK2 581 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 ZNF654Q8IZM8 581 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 GMLQ99445 158 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 OSBPL7Q9BZF2 842 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 DDX41Q9UJV9 622 aaKnown RBP9.61□□□□□ -0.87
VMP1-213ENST00000591877 ATP6V0A2Q9Y487 856 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 DUOX1Q9NRD9 1551 aa9.61□□□□□ -0.87
VMP1-213ENST00000591877 SP8Q8IXZ3 490 aa9.6□□□□□ -0.87
VMP1-213ENST00000591877 EPS8L3Q8TE67 593 aaKnown RBP9.6□□□□□ -0.87
VMP1-213ENST00000591877 RTFDC1Q9BY42 306 aaPredicted RBP9.6□□□□□ -0.87
VMP1-213ENST00000591877 TAF1DQ9H5J8 278 aaPredicted RBP9.6□□□□□ -0.87
VMP1-213ENST00000591877 TMEM63CQ9P1W3 806 aa9.6□□□□□ -0.87
VMP1-213ENST00000591877 CACNA1FO60840 1977 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms