RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-210ENST00000587235 FOXP2O15409 715 aa30.02■■■□□ 2.4
TCF3-210ENST00000587235 SNRNP48Q6IEG0 339 aaKnown RBP30.02■■■□□ 2.4
TCF3-210ENST00000587235 KIFC2Q96AC6 838 aa30.02■■■□□ 2.4
TCF3-210ENST00000587235 HELLSQ9NRZ9 838 aa30.02■■■□□ 2.4
TCF3-210ENST00000587235 MYH4Q9Y623 1939 aa30.01■■■□□ 2.39
TCF3-210ENST00000587235 ZBED4O75132 1171 aa30.01■■■□□ 2.39
TCF3-210ENST00000587235 ATN1P54259 1190 aaPredicted RBP30.01■■■□□ 2.39
TCF3-210ENST00000587235 CPXCR1Q8N123 301 aa30.01■■■□□ 2.39
TCF3-210ENST00000587235 GMCL1P1Q8NEA9 526 aa30.01■■■□□ 2.39
TCF3-210ENST00000587235 TINF2Q9BSI4 451 aa30.01■■■□□ 2.39
TCF3-210ENST00000587235 FEM1BQ9UK73 627 aa30.01■■■□□ 2.39
TCF3-210ENST00000587235 RIPK3Q9Y572 518 aa30.01■■■□□ 2.39
TCF3-210ENST00000587235 CTDP1Q9Y5B0 961 aaPredicted RBP30.01■■■□□ 2.39
TCF3-210ENST00000587235 PLIN4Q96Q06 1357 aa30.01■■■□□ 2.39
TCF3-210ENST00000587235 SLC4A3P48751 1232 aa30■■■□□ 2.39
TCF3-210ENST00000587235 SLFN13Q68D06 897 aa30■■■□□ 2.39
TCF3-210ENST00000587235 ATP2A1O14983 1001 aa29.99■■■□□ 2.39
TCF3-210ENST00000587235 MYCNP04198 464 aaPredicted RBP29.99■■■□□ 2.39
TCF3-210ENST00000587235 CTDSPL2Q05D32 466 aa29.99■■■□□ 2.39
TCF3-210ENST00000587235 VPS53Q5VIR6 699 aa29.99■■■□□ 2.39
TCF3-210ENST00000587235 PLEKHM2Q8IWE5 1019 aa29.99■■■□□ 2.39
TCF3-210ENST00000587235 INCENPQ9NQS7 918 aa29.99■■■□□ 2.39
TCF3-210ENST00000587235 NRBP1Q9UHY1 535 aa29.99■■■□□ 2.39
TCF3-210ENST00000587235 SZT2Q5T011 3432 aa29.99■■■□□ 2.39
TCF3-210ENST00000587235 KBTBD13C9JR72 458 aa29.98■■■□□ 2.39
TCF3-210ENST00000587235 SOX1O00570 391 aaPredicted RBP29.98■■■□□ 2.39
TCF3-210ENST00000587235 BMP3P12645 472 aa29.98■■■□□ 2.39
TCF3-210ENST00000587235 DDX11Q96FC9 970 aa29.98■■■□□ 2.39
TCF3-210ENST00000587235 SLC38A10Q9HBR0 1119 aa29.98■■■□□ 2.39
TCF3-210ENST00000587235 RAVER2Q9HCJ3 691 aaKnown RBP29.98■■■□□ 2.39
TCF3-210ENST00000587235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.98■■■□□ 2.393e-6■■■■□ 22.7
TCF3-210ENST00000587235 SMCHD1A6NHR9 2005 aa29.98■■■□□ 2.39
TCF3-210ENST00000587235 TRIM6-TRIM34B2RNG4 842 aa29.96■■■□□ 2.39
TCF3-210ENST00000587235 UBE2OQ9C0C9 1292 aaKnown RBP29.96■■■□□ 2.39
TCF3-210ENST00000587235 TSPY2A6NKD2 308 aa29.95■■■□□ 2.39
TCF3-210ENST00000587235 TAL1P17542 331 aaPredicted RBP29.95■■■□□ 2.39
TCF3-210ENST00000587235 LRRC41Q15345 812 aa29.95■■■□□ 2.39
TCF3-210ENST00000587235 MCMDC2Q4G0Z9 681 aa29.95■■■□□ 2.39
TCF3-210ENST00000587235 LRCH3Q96II8 777 aa29.95■■■□□ 2.39
TCF3-210ENST00000587235 FAM227BQ96M60 508 aa29.95■■■□□ 2.39
TCF3-210ENST00000587235 ANAPC4Q9UJX5 808 aa29.95■■■□□ 2.39
TCF3-210ENST00000587235 ISY1Q9ULR0 285 aaKnown RBP29.95■■■□□ 2.39
TCF3-210ENST00000587235 TACC3Q9Y6A5 838 aa29.95■■■□□ 2.39
TCF3-210ENST00000587235 PLXNA1Q9UIW2 1896 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 TMEM232C9JQI7 657 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 RARBP10826 455 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 RTP1P59025 263 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 ALX1Q15699 326 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 PPP4R3BQ5MIZ7 849 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 SLC39A5Q6ZMH5 540 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 CHMP4CQ96CF2 233 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 IL17RBQ9NRM6 502 aa29.94■■■□□ 2.38
TCF3-210ENST00000587235 DNAJC25-GNG10A0A024R161 153 aa29.93■■■□□ 2.38
TCF3-210ENST00000587235 ZNF865P0CJ78 1059 aaPredicted RBP29.93■■■□□ 2.38
TCF3-210ENST00000587235 MCCP23508 829 aa29.93■■■□□ 2.38
TCF3-210ENST00000587235 ADCYAP1R1P41586 468 aa29.93■■■□□ 2.38
TCF3-210ENST00000587235 MDM2Q00987 491 aaPredicted RBP29.93■■■□□ 2.38
TCF3-210ENST00000587235 RILPL2Q969X0 211 aa29.93■■■□□ 2.38
TCF3-210ENST00000587235 GMCL1Q96IK5 515 aa29.93■■■□□ 2.38
TCF3-210ENST00000587235 XPNPEP3Q9NQH7 507 aa29.93■■■□□ 2.38
TCF3-210ENST00000587235 STX8Q9UNK0 236 aa29.93■■■□□ 2.38
TCF3-210ENST00000587235 CNPY2Q9Y2B0 182 aa29.93■■■□□ 2.38
TCF3-210ENST00000587235 A0A0D9SFI3 127 aa29.92■■■□□ 2.38
TCF3-210ENST00000587235 RANBP6O60518 1105 aaKnown RBP29.92■■■□□ 2.38
TCF3-210ENST00000587235 NMT2O60551 498 aa29.92■■■□□ 2.38
TCF3-210ENST00000587235 SLC1A4P43007 532 aa29.92■■■□□ 2.38
TCF3-210ENST00000587235 OAZ1P54368 228 aa29.92■■■□□ 2.38
TCF3-210ENST00000587235 TDHQ8IZJ6 230 aa29.92■■■□□ 2.38
TCF3-210ENST00000587235 MSL3Q8N5Y2 521 aaKnown RBP29.92■■■□□ 2.38
TCF3-210ENST00000587235 CHURC1Q8WUH1 139 aa29.92■■■□□ 2.38
TCF3-210ENST00000587235 ATP11BQ9Y2G3 1177 aa29.92■■■□□ 2.38
TCF3-210ENST00000587235 FGAP02671 866 aa29.91■■■□□ 2.38
TCF3-210ENST00000587235 FDX1P10109 184 aa29.91■■■□□ 2.38
TCF3-210ENST00000587235 STAT2P52630 851 aa29.91■■■□□ 2.38
TCF3-210ENST00000587235 ANKRD35Q8N283 1001 aa29.91■■■□□ 2.38
TCF3-210ENST00000587235 CHST13Q8NET6 341 aa29.91■■■□□ 2.38
TCF3-210ENST00000587235 STAG1Q8WVM7 1258 aa29.91■■■□□ 2.38
TCF3-210ENST00000587235 FERMT2Q96AC1 680 aa29.91■■■□□ 2.38
TCF3-210ENST00000587235 FBXO40Q9UH90 709 aa29.91■■■□□ 2.38
TCF3-210ENST00000587235 SNAI1O95863 264 aaPredicted RBP29.9■■■□□ 2.38
TCF3-210ENST00000587235 MFAP1P55081 439 aaKnown RBP29.9■■■□□ 2.38
TCF3-210ENST00000587235 IRX6P78412 446 aaPredicted RBP29.9■■■□□ 2.38
TCF3-210ENST00000587235 IKQ13123 557 aaPredicted RBP29.9■■■□□ 2.38
TCF3-210ENST00000587235 MAMDC4Q6UXC1 1216 aa29.9■■■□□ 2.38
TCF3-210ENST00000587235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.9■■■□□ 2.382e-6■■■■□ 25.5
TCF3-210ENST00000587235 FAM160B2Q86V87 743 aa29.9■■■□□ 2.38
TCF3-210ENST00000587235 DNAH12Q6ZR08 3092 aa29.9■■■□□ 2.38
TCF3-210ENST00000587235 LAMA3Q16787 3333 aa29.89■■■□□ 2.38
TCF3-210ENST00000587235 ORC4O43929 436 aa29.89■■■□□ 2.38
TCF3-210ENST00000587235 PGK1P00558 417 aa29.89■■■□□ 2.38
TCF3-210ENST00000587235 FGRP09769 529 aa29.89■■■□□ 2.38
TCF3-210ENST00000587235 AKR1A1P14550 325 aa29.89■■■□□ 2.38
TCF3-210ENST00000587235 NMIQ13287 307 aaPredicted RBP29.89■■■□□ 2.38
TCF3-210ENST00000587235 RCSD1Q6JBY9 416 aa29.89■■■□□ 2.38
TCF3-210ENST00000587235 LBHD1Q9BQE6 289 aaPredicted RBP29.89■■■□□ 2.38
TCF3-210ENST00000587235 PRKAG2Q9UGJ0 569 aa29.89■■■□□ 2.38
TCF3-210ENST00000587235 SYNGAP1Q96PV0 1343 aa29.89■■■□□ 2.38
TCF3-210ENST00000587235 HIP1O00291 1037 aa29.88■■■□□ 2.37
TCF3-210ENST00000587235 HSPD1P10809 573 aaKnown RBP29.88■■■□□ 2.37
TCF3-210ENST00000587235 SDSP20132 328 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms