RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 CWC15Q9P013 229 aaKnown RBP7.26□□□□□ -1.25
SMAD4-203ENST00000585448 USP19O94966 1318 aa7.26□□□□□ -1.25
SMAD4-203ENST00000585448 CCNB3Q8WWL7 1395 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 TONSLQ96HA7 1378 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 NPC1L1Q9UHC9 1359 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 CCDC196A0A1B0GTZ2 297 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 A0A1B0GUL7 405 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 CTIFO43310 598 aaKnown RBP7.25□□□□□ -1.25
SMAD4-203ENST00000585448 MED26O95402 600 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 CYP7A1P22680 504 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 ETV3P41162 512 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 CLCQ05315 142 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 MTA1Q13330 715 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 HDAC1Q13547 482 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-203ENST00000585448 RABEP1Q15276 862 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 C9orf131Q5VYM1 1079 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 EP400NLQ6ZTU2 488 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 TAB3Q8N5C8 712 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-203ENST00000585448 NETO1Q8TDF5 533 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 PPP1R13LQ8WUF5 828 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 ZBTB9Q96C00 473 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 SEC16BQ96JE7 1060 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 CCSER2Q9H7U1 834 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 CNNM2Q9H8M5 875 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 ZC3H7BQ9UGR2 993 aaKnown RBP7.25□□□□□ -1.25
SMAD4-203ENST00000585448 SUFUQ9UMX1 484 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 CEP131Q9UPN4 1083 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 PAXBP1Q9Y5B6 917 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 SNX11Q9Y5W9 270 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 SCRIBQ14160 1630 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 MAP3K1Q13233 1512 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 ARHGAP31Q2M1Z3 1444 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 MAPK8IP3Q9UPT6 1336 aa7.25□□□□□ -1.25
SMAD4-203ENST00000585448 MPHOSPH10O00566 681 aaKnown RBP7.24□□□□□ -1.25
SMAD4-203ENST00000585448 TNFRSF10CO14798 259 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 RGS13O14921 159 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 CTAGE5O15320 804 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 HYAL3O43820 417 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-203ENST00000585448 CEACAM5P06731 702 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 U2AF2P26368 475 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMAD4-203ENST00000585448 ERCC5P28715 1186 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-203ENST00000585448 CYP2C19P33261 490 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 CCDC184Q52MB2 194 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 TXLNBQ8N3L3 684 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 ZNF526Q8TF50 670 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-203ENST00000585448 TMEM40Q8WWA1 233 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 CCDC74BQ96LY2 380 aa7.24□□□□□ -1.25
SMAD4-203ENST00000585448 COL17A1Q9UMD9 1497 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-203ENST00000585448 ABCA5Q8WWZ7 1642 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 SCO2A0A1W2PP80 73 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 CCDC189A1A4V9 331 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 UPK3BL1B0FP48 263 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 CHURC1-FNTBB4DL54 471 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 UPK3BL2E5RIL1 263 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 CLCN7P51798 805 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 IFI16Q16666 785 aaKnown RBP7.23□□□□□ -1.25
SMAD4-203ENST00000585448 HSP90AB4PQ58FF6 505 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 SFRP5Q5T4F7 317 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 INTS3Q68E01 1043 aaKnown RBP7.23□□□□□ -1.25
SMAD4-203ENST00000585448 GK5Q6ZS86 529 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 ANKRD23Q86SG2 305 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 SUGP1Q8IWZ8 645 aaKnown RBP7.23□□□□□ -1.25
SMAD4-203ENST00000585448 STK11IPQ8N1F8 1099 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 TBC1D22AQ8WUA7 517 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 PIBF1Q8WXW3 757 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 ACBD3Q9H3P7 528 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 ZFP64Q9NPA5 681 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 CTNNA3Q9UI47 895 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 STRIP2Q9ULQ0 834 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 JRKLQ9Y4A0 524 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 KIF21BO75037 1637 aa7.23□□□□□ -1.25
SMAD4-203ENST00000585448 ROCK2O75116 1388 aaKnown RBP7.22□□□□□ -1.25
SMAD4-203ENST00000585448 TMEM265A0A087WTH1 108 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 ATP2B1P20020 1258 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 SSTR4P31391 388 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 CCDC96Q2M329 555 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 KLHL40Q2TBA0 621 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 OVOS1Q6IE37 1185 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 TSHZ1Q6ZSZ6 1077 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 NLRC3Q7RTR2 1065 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 VSIG10LQ86VR7 867 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 RIN3Q8TB24 985 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 PIWIL2Q8TC59 973 aaKnown RBP7.22□□□□□ -1.25
SMAD4-203ENST00000585448 ATG4CQ96DT6 458 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 CEP89Q96ST8 783 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 DPH2Q9BQC3 489 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-203ENST00000585448 SPTLC3Q9NUV7 552 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 KLHL3Q9UH77 587 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 TPX2Q9ULW0 747 aaKnown RBP7.22□□□□□ -1.25
SMAD4-203ENST00000585448 U3KQE9 123 aa7.22□□□□□ -1.25
SMAD4-203ENST00000585448 INSRP06213 1382 aa7.21□□□□□ -1.25
SMAD4-203ENST00000585448 H0YHG0 523 aa7.21□□□□□ -1.26
SMAD4-203ENST00000585448 IPO7O95373 1038 aaKnown RBP7.21□□□□□ -1.26
SMAD4-203ENST00000585448 TPM3P06753 285 aa7.21□□□□□ -1.26
SMAD4-203ENST00000585448 NME1P15531 152 aaKnown RBP7.21□□□□□ -1.26
SMAD4-203ENST00000585448 HNRNPH2P55795 449 aaKnown RBP7.21□□□□□ -1.26
SMAD4-203ENST00000585448 SARNPP82979 210 aaKnown RBP7.21□□□□□ -1.26
SMAD4-203ENST00000585448 TEX35Q5T0J7 233 aa7.21□□□□□ -1.26
SMAD4-203ENST00000585448 CLEC17AQ6ZS10 378 aa7.21□□□□□ -1.26
SMAD4-203ENST00000585448 SPACA3Q8IXA5 215 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms