RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 KIFC2Q96AC6 838 aa18.03■□□□□ 0.48
IFT20-206ENST00000578122 TMEM87BQ96K49 555 aa18.03■□□□□ 0.48
IFT20-206ENST00000578122 EFCC1Q9HA90 598 aa18.03■□□□□ 0.48
IFT20-206ENST00000578122 GPCPD1Q9NPB8 672 aa18.03■□□□□ 0.48
IFT20-206ENST00000578122 BTBD7Q9P203 1132 aa18.03■□□□□ 0.48
IFT20-206ENST00000578122 ADAMTS5Q9UNA0 930 aa18.03■□□□□ 0.48
IFT20-206ENST00000578122 FRMPD2Q68DX3 1309 aaPredicted RBP18.02■□□□□ 0.48
IFT20-206ENST00000578122 PCNTO95613 3336 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 PLA2G6O60733 806 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 FMNL1O95466 1100 aaPredicted RBP18.02■□□□□ 0.48
IFT20-206ENST00000578122 SEC24BO95487 1268 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 SNHG28P0DPA3 235 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 CTGFP29279 349 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 STAT2P52630 851 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 FCGRTP55899 365 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 ZNF543Q08ER8 600 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 DHX32Q7L7V1 743 aaKnown RBP18.02■□□□□ 0.48
IFT20-206ENST00000578122 JAKMIP1Q96N16 626 aaKnown RBP18.02■□□□□ 0.48
IFT20-206ENST00000578122 SENP2Q9HC62 589 aa18.02■□□□□ 0.48
IFT20-206ENST00000578122 GPHNQ9NQX3 736 aaPredicted RBP18.02■□□□□ 0.48
IFT20-206ENST00000578122 WDR19Q8NEZ3 1342 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 VWA5AO00534 786 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 SH2B2O14492 632 aaPredicted RBP18.01■□□□□ 0.47
IFT20-206ENST00000578122 GALR2O43603 387 aaPredicted RBP18.01■□□□□ 0.47
IFT20-206ENST00000578122 HMGB1P09429 215 aaKnown RBP18.01■□□□□ 0.47
IFT20-206ENST00000578122 PSMA5P28066 241 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 CCNA1P78396 465 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 COL13A1Q5TAT6 717 aaPredicted RBP18.01■□□□□ 0.47
IFT20-206ENST00000578122 TTBK2Q6IQ55 1244 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 OTOP1Q7RTM1 612 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 TMTC2Q8N394 836 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 TRIM47Q96LD4 638 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 LRRC2Q9BYS8 371 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 LY9Q9HBG7 655 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 TRIM17Q9Y577 477 aa18.01■□□□□ 0.47
IFT20-206ENST00000578122 ZBED4O75132 1171 aa18■□□□□ 0.47
IFT20-206ENST00000578122 EXOSC10Q01780 885 aaKnown RBP18■□□□□ 0.47
IFT20-206ENST00000578122 PLS1Q14651 629 aa18■□□□□ 0.47
IFT20-206ENST00000578122 TMEM132BQ14DG7 1078 aa18■□□□□ 0.47
IFT20-206ENST00000578122 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
IFT20-206ENST00000578122 BTNL9Q6UXG8 535 aa18■□□□□ 0.47
IFT20-206ENST00000578122 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
IFT20-206ENST00000578122 SPATC1LQ9H0A9 340 aa18■□□□□ 0.47
IFT20-206ENST00000578122 CTDP1Q9Y5B0 961 aaPredicted RBP18■□□□□ 0.47
IFT20-206ENST00000578122 TNPO2O14787 897 aaKnown RBP17.99■□□□□ 0.47
IFT20-206ENST00000578122 GNRH1P01148 92 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 PARP1P09874 1014 aaKnown RBP17.99■□□□□ 0.47
IFT20-206ENST00000578122 FDX1P10109 184 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 HOXD10P28358 340 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 SLC16A2P36021 539 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 ASPRV1Q53RT3 343 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 GPATCH4Q5T3I0 446 aaKnown RBP17.99■□□□□ 0.47
IFT20-206ENST00000578122 NFXL1Q6ZNB6 911 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 REPS2Q8NFH8 660 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 PORCNQ9H237 461 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 PRR12Q9ULL5 1215 aa17.99■□□□□ 0.47
IFT20-206ENST00000578122 CCDC69A6NI79 296 aa17.98■□□□□ 0.47
IFT20-206ENST00000578122 GOLGA8HP0CJ92 632 aa17.98■□□□□ 0.47
IFT20-206ENST00000578122 CPA1P15085 419 aa17.98■□□□□ 0.47
IFT20-206ENST00000578122 MAPK4P31152 587 aa17.98■□□□□ 0.47
IFT20-206ENST00000578122 LIFRP42702 1097 aa17.98■□□□□ 0.47
IFT20-206ENST00000578122 PKN2Q16513 984 aaKnown RBP17.98■□□□□ 0.47
IFT20-206ENST00000578122 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
IFT20-206ENST00000578122 COA7Q96BR5 231 aa17.98■□□□□ 0.47
IFT20-206ENST00000578122 MOV10L1Q9BXT6 1211 aaKnown RBP17.98■□□□□ 0.47
IFT20-206ENST00000578122 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
IFT20-206ENST00000578122 CWC22Q9HCG8 908 aaKnown RBP17.98■□□□□ 0.47
IFT20-206ENST00000578122 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
IFT20-206ENST00000578122 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
IFT20-206ENST00000578122 STAT3P40763 770 aa17.97■□□□□ 0.47
IFT20-206ENST00000578122 TROAPQ12815 778 aa17.97■□□□□ 0.47
IFT20-206ENST00000578122 GRM4Q14833 912 aa17.97■□□□□ 0.47
IFT20-206ENST00000578122 ZNF654Q8IZM8 581 aa17.97■□□□□ 0.47
IFT20-206ENST00000578122 SHCBP1Q8NEM2 672 aa17.97■□□□□ 0.47
IFT20-206ENST00000578122 TM6SF1Q9BZW5 370 aa17.97■□□□□ 0.47
IFT20-206ENST00000578122 SRRDQ9UH36 339 aa17.97■□□□□ 0.47
IFT20-206ENST00000578122 ZNF214Q9UL59 606 aaPredicted RBP17.97■□□□□ 0.47
IFT20-206ENST00000578122 ATP2A1O14983 1001 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 DDAH1O94760 285 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 SLC25A27O95847 323 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 PRMT2P55345 433 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 ANAPC15P60006 121 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 SNAP25P60880 206 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 FGD1P98174 961 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 WDR78Q5VTH9 848 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 LHX8Q68G74 356 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 GPR142Q7Z601 462 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 PLEKHH3Q7Z736 793 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 SGMS1Q86VZ5 419 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 RIOX2Q8IUF8 465 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 CPXCR1Q8N123 301 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 NUP133Q8WUM0 1156 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 TEX13BQ9BXU2 312 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 MCOLN1Q9GZU1 580 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 UBA5Q9GZZ9 404 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 RAVER2Q9HCJ3 691 aaKnown RBP17.96■□□□□ 0.47
IFT20-206ENST00000578122 ZSWIM6Q9HCJ5 1215 aa17.96■□□□□ 0.47
IFT20-206ENST00000578122 MYH6P13533 1939 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms