RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 C7orf61Q8IZ16 206 aa14.12□□□□□ -0.15
LITAF-219ENST00000576334 MMP19Q99542 508 aa14.12□□□□□ -0.15
LITAF-219ENST00000576334 IL25Q9H293 177 aa14.12□□□□□ -0.15
LITAF-219ENST00000576334 OSBPL3Q9H4L5 887 aa14.12□□□□□ -0.15
LITAF-219ENST00000576334 C11orf49Q9H6J7 331 aa14.12□□□□□ -0.15
LITAF-219ENST00000576334 ZNF287Q9HBT7 754 aa14.12□□□□□ -0.15
LITAF-219ENST00000576334 RAVER2Q9HCJ3 691 aaKnown RBP14.12□□□□□ -0.15
LITAF-219ENST00000576334 ISY1Q9ULR0 285 aaKnown RBP14.12□□□□□ -0.15
LITAF-219ENST00000576334 SMCHD1A6NHR9 2005 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 SLC3A2P08195 630 aaKnown RBP14.11□□□□□ -0.15
LITAF-219ENST00000576334 FCER1AP12319 257 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 ALX1Q15699 326 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 SNRNP48Q6IEG0 339 aaKnown RBP14.11□□□□□ -0.15
LITAF-219ENST00000576334 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
LITAF-219ENST00000576334 ANKLE1Q8NAG6 615 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 PRPF38AQ8NAV1 312 aaKnown RBP14.11□□□□□ -0.15
LITAF-219ENST00000576334 MAML3Q96JK9 1138 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 RBM27Q9P2N5 1060 aaKnown RBP14.11□□□□□ -0.15
LITAF-219ENST00000576334 DDX20Q9UHI6 824 aaKnown RBP14.11□□□□□ -0.15
LITAF-219ENST00000576334 ANAPC4Q9UJX5 808 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 ZMYND8Q9ULU4 1186 aaPredicted RBP14.11□□□□□ -0.15
LITAF-219ENST00000576334 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 TRIOBPQ9H2D6 2365 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 CCDC171Q6TFL3 1326 aa14.11□□□□□ -0.15
LITAF-219ENST00000576334 TMEM232C9JQI7 657 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 SLC25A27O95847 323 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 BMP3P12645 472 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 SYN1P17600 705 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 OLFML2BQ68BL8 750 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 KCTD1Q719H9 257 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 TBC1D10CQ8IV04 446 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 GMCL1P1Q8NEA9 526 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 LAMA3Q16787 3333 aa14.1□□□□□ -0.15
LITAF-219ENST00000576334 ORC4O43929 436 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 FGRP09769 529 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 COL6A1P12109 1028 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 LRRC26Q2I0M4 334 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 GJC2Q5T442 439 aaPredicted RBP14.09□□□□□ -0.15
LITAF-219ENST00000576334 ABRAQ8N0Z2 381 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 LENG1Q96BZ8 264 aaPredicted RBP14.09□□□□□ -0.15
LITAF-219ENST00000576334 SLC38A10Q9HBR0 1119 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 HOMER2Q9NSB8 354 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 FEM1BQ9UK73 627 aa14.09□□□□□ -0.15
LITAF-219ENST00000576334 ZBED4O75132 1171 aa14.08□□□□□ -0.16
LITAF-219ENST00000576334 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
LITAF-219ENST00000576334 GSPT1P15170 499 aaKnown RBP14.08□□□□□ -0.16
LITAF-219ENST00000576334 FXR1P51114 621 aaKnown RBP eCLIP14.08□□□□□ -0.16
LITAF-219ENST00000576334 KCTD2Q14681 263 aa14.08□□□□□ -0.16
LITAF-219ENST00000576334 TTBK2Q6IQ55 1244 aa14.08□□□□□ -0.16
LITAF-219ENST00000576334 AGBL1Q96MI9 1066 aa14.08□□□□□ -0.16
LITAF-219ENST00000576334 TEX13BQ9BXU2 312 aa14.08□□□□□ -0.16
LITAF-219ENST00000576334 NR2E3Q9Y5X4 410 aa14.08□□□□□ -0.16
LITAF-219ENST00000576334 DDX49Q9Y6V7 483 aaKnown RBP14.08□□□□□ -0.16
LITAF-219ENST00000576334 NEDD4P46934 1319 aa14.08□□□□□ -0.16
LITAF-219ENST00000576334 MCM3APO60318 1980 aa14.07□□□□□ -0.16
LITAF-219ENST00000576334 SLC16A2P36021 539 aa14.07□□□□□ -0.16
LITAF-219ENST00000576334 SLC1A4P43007 532 aa14.07□□□□□ -0.16
LITAF-219ENST00000576334 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
LITAF-219ENST00000576334 IKQ13123 557 aaPredicted RBP14.07□□□□□ -0.16
LITAF-219ENST00000576334 ZKSCAN3Q9BRR0 538 aa14.07□□□□□ -0.16
LITAF-219ENST00000576334 SENP6Q9GZR1 1112 aaPredicted RBP14.07□□□□□ -0.16
LITAF-219ENST00000576334 PRO3102Q9H379 93 aa14.07□□□□□ -0.16
LITAF-219ENST00000576334 ZNF536O15090 1300 aa14.07□□□□□ -0.16
LITAF-219ENST00000576334 LAMA2P24043 3122 aaKnown RBP14.06□□□□□ -0.16
LITAF-219ENST00000576334 ATP2A1O14983 1001 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 NOVP48745 357 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 STAT2P52630 851 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
LITAF-219ENST00000576334 CCDC174Q6PII3 467 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 STAG1Q8WVM7 1258 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 GMCL1Q96IK5 515 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 FGD4Q96M96 766 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 TMEM47Q9BQJ4 181 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 TINF2Q9BSI4 451 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 DIAPH3Q9NSV4 1193 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 SLC5A4Q9NY91 659 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 SYNPO2Q9UMS6 1093 aa14.06□□□□□ -0.16
LITAF-219ENST00000576334 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
LITAF-219ENST00000576334 FRMPD2Q68DX3 1309 aaPredicted RBP14.06□□□□□ -0.16
LITAF-219ENST00000576334 DNAJC25-GNG10A0A024R161 153 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 SEPT4O43236 478 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 SNAI1O95863 264 aaPredicted RBP14.05□□□□□ -0.16
LITAF-219ENST00000576334 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
LITAF-219ENST00000576334 CAPN2P17655 700 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 CNTN2Q02246 1040 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 CCDC96Q2M329 555 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 MUM1L1Q5H9M0 696 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 RCSD1Q6JBY9 416 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 SKAP1Q86WV1 359 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 FERMT2Q96AC1 680 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 DDX11Q96FC9 970 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 GPCPD1Q9NPB8 672 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 PRR12Q9ULL5 1215 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 LAMA4Q16363 1823 aa14.05□□□□□ -0.16
LITAF-219ENST00000576334 PGK1P00558 417 aa14.04□□□□□ -0.16
LITAF-219ENST00000576334 ALAS1P13196 640 aa14.04□□□□□ -0.16
LITAF-219ENST00000576334 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms