RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MAML3Q96JK9 1138 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 FAM227BQ96M60 508 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 TEX13BQ9BXU2 312 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 ZNF214Q9UL59 606 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 ADAMTS5Q9UNA0 930 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 MYH6P13533 1939 aa11.45□□□□□ -0.58
NPLOC4-216ENST00000574344 KBTBD13C9JR72 458 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 BMP3P12645 472 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 SYN1P17600 705 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 FXR1P51114 621 aaKnown RBP eCLIP11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 NMIQ13287 307 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 RRP12Q5JTH9 1297 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 CHD1LQ86WJ1 897 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 SMC5Q8IY18 1101 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 GMCL1P1Q8NEA9 526 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 TRPV1Q8NER1 839 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 FEM1BQ9UK73 627 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
NPLOC4-216ENST00000574344 TMEM232C9JQI7 657 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 FOXP2O15409 715 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 SLC1A4P43007 532 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 STAT2P52630 851 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 REPS2Q8NFH8 660 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 MKL1Q969V6 931 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 DDX11Q96FC9 970 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 SENP6Q9GZR1 1112 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 SYNPO2Q9UMS6 1093 aa11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
NPLOC4-216ENST00000574344 CCDC171Q6TFL3 1326 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 SEPT4O43236 478 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 IGHDP01880 384 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 MFAP1P55081 439 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 HAND2P61296 217 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 NUCB1Q02818 461 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 CCDC96Q2M329 555 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 GJC2Q5T442 439 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 ZNF589Q86UQ0 364 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 ARRDC4Q8NCT1 418 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 HOMER2Q9NSB8 354 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 DIAPH3Q9NSV4 1193 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 RANBP2P49792 3224 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 LTBP2Q14767 1821 aa11.42□□□□□ -0.58
NPLOC4-216ENST00000574344 DNM1LO00429 736 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 NMT2O60551 498 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 HSPD1P10809 573 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 COL6A1P12109 1028 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 MCCP23508 829 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 ANP32AP39687 249 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 ALX1Q15699 326 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 LRRC26Q2I0M4 334 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 ZNF792Q3KQV3 632 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 KCTD1Q719H9 257 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 FAM160B2Q86V87 743 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 PLEKHM2Q8IWE5 1019 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 ANKRD35Q8N283 1001 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 CHURC1Q8WUH1 139 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 TINF2Q9BSI4 451 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 SLC38A10Q9HBR0 1119 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 FBXO40Q9UH90 709 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 ANAPC4Q9UJX5 808 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 CNPY2Q9Y2B0 182 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 DIS3Q9Y2L1 958 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 LCTP09848 1927 aa11.41□□□□□ -0.58
NPLOC4-216ENST00000574344 LRRC37A2A6NM11 1700 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 ZMYM6O95789 1325 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 ATP2A1O14983 1001 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 ORC4O43929 436 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 FGAP02671 866 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 FDX1P10109 184 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 RARBP10826 455 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 SDSP20132 328 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 CWC27Q6UX04 472 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 TICAM2Q86XR7 235 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 XPNPEP3Q9NQH7 507 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 PRKAG2Q9UGJ0 569 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
NPLOC4-216ENST00000574344 A0A1W2PPC1 479 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 HIP1O00291 1037 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 IGHA2P01877 340 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 AKR1A1P14550 325 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 MAGEA10P43363 369 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 OAZ1P54368 228 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 CCDC174Q6PII3 467 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 MFSD6Q6ZSS7 791 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 RASGRP2Q7LDG7 609 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 STAG1Q8WVM7 1258 aa11.39□□□□□ -0.59
NPLOC4-216ENST00000574344 OSBPL3Q9H4L5 887 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms