RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 MRVI1Q9Y6F6 885 aa32.57■■■□□ 2.8
CTDNEP1-210ENST00000574322 SHTN1A0MZ66 631 aa32.56■■■□□ 2.8
CTDNEP1-210ENST00000574322 ZNF202O95125 648 aa32.56■■■□□ 2.8
CTDNEP1-210ENST00000574322 ZNF526Q8TF50 670 aaPredicted RBP32.56■■■□□ 2.8
CTDNEP1-210ENST00000574322 CSRNP1Q96S65 589 aa32.56■■■□□ 2.8
CTDNEP1-210ENST00000574322 ZMYND12Q9H0C1 365 aa32.56■■■□□ 2.8
CTDNEP1-210ENST00000574322 CNTNAP1P78357 1384 aa32.56■■■□□ 2.8
CTDNEP1-210ENST00000574322 FAM196BA6NMK8 535 aa32.55■■■□□ 2.8
CTDNEP1-210ENST00000574322 H7C1D1 291 aa32.55■■■□□ 2.8
CTDNEP1-210ENST00000574322 SASS6Q6UVJ0 657 aa32.55■■■□□ 2.8
CTDNEP1-210ENST00000574322 HEATR3Q7Z4Q2 680 aa32.55■■■□□ 2.8
CTDNEP1-210ENST00000574322 FAM83AQ86UY5 434 aa32.55■■■□□ 2.8
CTDNEP1-210ENST00000574322 SEC63Q9UGP8 760 aaKnown RBP32.55■■■□□ 2.8
CTDNEP1-210ENST00000574322 CAVIN2O95810 425 aa32.54■■■□□ 2.8
CTDNEP1-210ENST00000574322 EPS15P42566 896 aa32.54■■■□□ 2.8
CTDNEP1-210ENST00000574322 ZNF280AP59817 542 aaPredicted RBP32.54■■■□□ 2.8
CTDNEP1-210ENST00000574322 ABCB5Q2M3G0 1257 aa32.54■■■□□ 2.8
CTDNEP1-210ENST00000574322 PDLIM2Q96JY6 352 aa32.54■■■□□ 2.8
CTDNEP1-210ENST00000574322 CLIC6Q96NY7 704 aa32.54■■■□□ 2.8
CTDNEP1-210ENST00000574322 CPVLQ9H3G5 476 aa32.54■■■□□ 2.8
CTDNEP1-210ENST00000574322 SYNPO2Q9UMS6 1093 aa32.54■■■□□ 2.8
CTDNEP1-210ENST00000574322 ESYT2A0FGR8 921 aa32.53■■■□□ 2.8
CTDNEP1-210ENST00000574322 TCP10L2B9ZVM9 353 aa32.53■■■□□ 2.8
CTDNEP1-210ENST00000574322 NOM1Q5C9Z4 860 aaKnown RBP32.53■■■□□ 2.8
CTDNEP1-210ENST00000574322 TTC38Q5R3I4 469 aa32.53■■■□□ 2.8
CTDNEP1-210ENST00000574322 SIAH1Q8IUQ4 282 aa32.53■■■□□ 2.8
CTDNEP1-210ENST00000574322 PIGSQ96S52 555 aa32.53■■■□□ 2.8
CTDNEP1-210ENST00000574322 HACL1Q9UJ83 578 aa32.53■■■□□ 2.8
CTDNEP1-210ENST00000574322 CLRN2A0PK11 232 aa32.52■■■□□ 2.8
CTDNEP1-210ENST00000574322 IQCA1LA6NCM1 817 aa32.52■■■□□ 2.8
CTDNEP1-210ENST00000574322 EEF2P13639 858 aaKnown RBP32.52■■■□□ 2.8
CTDNEP1-210ENST00000574322 SYKP43405 635 aa32.52■■■□□ 2.8
CTDNEP1-210ENST00000574322 PIK3AP1Q6ZUJ8 805 aa32.52■■■□□ 2.8
CTDNEP1-210ENST00000574322 UBA5Q9GZZ9 404 aa32.52■■■□□ 2.8
CTDNEP1-210ENST00000574322 FRMPD2Q68DX3 1309 aaPredicted RBP32.52■■■□□ 2.8
CTDNEP1-210ENST00000574322 ADAMTS3O15072 1205 aa32.51■■■□□ 2.8
CTDNEP1-210ENST00000574322 ELOA2Q8IYF1 753 aaPredicted RBP32.51■■■□□ 2.8
CTDNEP1-210ENST00000574322 FAM200AQ8TCP9 573 aa32.51■■■□□ 2.8
CTDNEP1-210ENST00000574322 DCAF4Q8WV16 495 aa32.51■■■□□ 2.8
CTDNEP1-210ENST00000574322 SDF4Q9BRK5 362 aa32.51■■■□□ 2.8
CTDNEP1-210ENST00000574322 MYOZ2Q9NPC6 264 aa32.51■■■□□ 2.8
CTDNEP1-210ENST00000574322 TBC1D12O60347 775 aa32.51■■■□□ 2.79
CTDNEP1-210ENST00000574322 SEPT2Q15019 361 aa32.51■■■□□ 2.79
CTDNEP1-210ENST00000574322 FERMT2Q96AC1 680 aa32.51■■■□□ 2.79
CTDNEP1-210ENST00000574322 PCDHA6Q9UN73 950 aa32.51■■■□□ 2.79
CTDNEP1-210ENST00000574322 PCDHA8Q9Y5H6 950 aa32.51■■■□□ 2.79
CTDNEP1-210ENST00000574322 MYO1BO43795 1136 aa32.5■■■□□ 2.79
CTDNEP1-210ENST00000574322 ATP2B1P20020 1258 aa32.5■■■□□ 2.79
CTDNEP1-210ENST00000574322 RBM26Q5T8P6 1007 aaKnown RBP32.5■■■□□ 2.79
CTDNEP1-210ENST00000574322 SAMD7Q7Z3H4 446 aa32.5■■■□□ 2.79
CTDNEP1-210ENST00000574322 MTMR8Q96EF0 704 aa32.5■■■□□ 2.79
CTDNEP1-210ENST00000574322 YY1P25490 414 aa32.49■■■□□ 2.79
CTDNEP1-210ENST00000574322 GNA11P29992 359 aa32.49■■■□□ 2.79
CTDNEP1-210ENST00000574322 ATP2C1P98194 919 aaPredicted RBP32.49■■■□□ 2.79
CTDNEP1-210ENST00000574322 ICA1Q05084 483 aa32.49■■■□□ 2.79
CTDNEP1-210ENST00000574322 GMCL1P1Q8NEA9 526 aa32.49■■■□□ 2.79
CTDNEP1-210ENST00000574322 RRAGCQ9HB90 399 aa32.49■■■□□ 2.79
CTDNEP1-210ENST00000574322 C6orf50Q9HD87 102 aa32.49■■■□□ 2.79
CTDNEP1-210ENST00000574322 WDR90Q96KV7 1748 aa32.49■■■□□ 2.79
CTDNEP1-210ENST00000574322 POTECB2RU33 542 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 WNT7AO00755 349 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 NAPAP54920 295 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 TBC1D10BQ4KMP7 808 aaPredicted RBP32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 ADARB2Q9NS39 739 aaKnown RBP32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 KCNH3Q9ULD8 1083 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 WNT10BO00744 389 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 SHROOM1Q2M3G4 852 aaPredicted RBP32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 HOMER1Q86YM7 354 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 JMJD4Q9H9V9 463 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 VAT1LQ9HCJ6 419 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 GPCPD1Q9NPB8 672 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 FAM13BQ9NYF5 915 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 PGAP2Q9UHJ9 254 aa32.48■■■□□ 2.79
CTDNEP1-210ENST00000574322 PNMA6FA0A0J9YX94 578 aa32.47■■■□□ 2.79
CTDNEP1-210ENST00000574322 EPHX2P34913 555 aa32.47■■■□□ 2.79
CTDNEP1-210ENST00000574322 ATP2B2Q01814 1243 aa32.47■■■□□ 2.79
CTDNEP1-210ENST00000574322 RRP1BQ14684 758 aaKnown RBP32.47■■■□□ 2.79
CTDNEP1-210ENST00000574322 ANO6Q4KMQ2 910 aa32.47■■■□□ 2.79
CTDNEP1-210ENST00000574322 KIAA1468Q9P260 1216 aa32.47■■■□□ 2.79
CTDNEP1-210ENST00000574322 CCDC194A0A1B0GVG4 234 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 EGFRP00533 1210 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 MAP3K10Q02779 954 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 GRIN1Q05586 938 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 KIF4BQ2VIQ3 1234 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 PPP1R18Q6NYC8 613 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 ADGRF4Q8IZF3 695 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 NMRK2Q9NPI5 230 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 SMCO2A6NFE2 343 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 GDF11O95390 407 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 ZNF174Q15697 407 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 STX1AQ16623 288 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 TRPM4Q8TD43 1214 aa32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 TAF1DQ9H5J8 278 aaPredicted RBP32.46■■■□□ 2.79
CTDNEP1-210ENST00000574322 GH2P01242 217 aa32.45■■■□□ 2.78
CTDNEP1-210ENST00000574322 JAG1P78504 1218 aa32.45■■■□□ 2.78
CTDNEP1-210ENST00000574322 SLFN13Q68D06 897 aa32.45■■■□□ 2.78
CTDNEP1-210ENST00000574322 KRT25Q7Z3Z0 450 aa32.45■■■□□ 2.78
CTDNEP1-210ENST00000574322 GMCL1Q96IK5 515 aa32.45■■■□□ 2.78
CTDNEP1-210ENST00000574322 PTGDRQ13258 359 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms