RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 GPCPD1Q9NPB8 672 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 EMILIN3Q9NT22 766 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 OTOFQ9HC10 1997 aa14.98□□□□□ -0.01
SPG7-209ENST00000564047 STK36Q9NRP7 1315 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 CENPFP49454 3210 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 WDR46O15213 610 aaKnown RBP14.97□□□□□ -0.01
SPG7-209ENST00000564047 GJB2P29033 226 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 SSRP1Q08945 709 aaKnown RBP14.97□□□□□ -0.01
SPG7-209ENST00000564047 KCTD1Q719H9 257 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
SPG7-209ENST00000564047 TRIM22Q8IYM9 498 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 SPICE1Q8N0Z3 855 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 CMTR1Q8N1G2 835 aaKnown RBP14.97□□□□□ -0.01
SPG7-209ENST00000564047 SPZ1Q9BXG8 430 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 TMOD4Q9NZQ9 345 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 RBM27Q9P2N5 1060 aaKnown RBP14.97□□□□□ -0.01
SPG7-209ENST00000564047 KCNH4Q9UQ05 1017 aa14.97□□□□□ -0.01
SPG7-209ENST00000564047 CNTNAP5Q8WYK1 1306 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 MYH4Q9Y623 1939 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 IRF6O14896 467 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 PRPF3O43395 683 aaKnown RBP14.96□□□□□ -0.01
SPG7-209ENST00000564047 PLA2G6O60733 806 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 FDPSP14324 419 aaKnown RBP14.96□□□□□ -0.01
SPG7-209ENST00000564047 FAM83BQ5T0W9 1011 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 BTNL9Q6UXG8 535 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 CCDC82Q8N4S0 544 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 FAM184AQ8NB25 1140 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 PHKBQ93100 1093 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 DDX11Q96FC9 970 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
SPG7-209ENST00000564047 SLC26A6Q9BXS9 759 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 RIOX1Q9H6W3 641 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.96□□□□□ -0.01
SPG7-209ENST00000564047 ORC3Q9UBD5 711 aaPredicted RBP14.96□□□□□ -0.01
SPG7-209ENST00000564047 KIF3AQ9Y496 699 aa14.96□□□□□ -0.01
SPG7-209ENST00000564047 A0A0G2JLL6 359 aaPredicted RBP14.95□□□□□ -0.02
SPG7-209ENST00000564047 TMEM232C9JQI7 657 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 CYTH3O43739 400 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 DEXIO95424 95 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 SLC10A3P09131 477 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 VCAM1P19320 739 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 STAT2P52630 851 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 HMGCS2P54868 508 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
SPG7-209ENST00000564047 SLC35G1Q2M3R5 365 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 TTBK2Q6IQ55 1244 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 PRRT2Q7Z6L0 340 aaPredicted RBP14.95□□□□□ -0.02
SPG7-209ENST00000564047 FAM160B2Q86V87 743 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 CHURC1Q8WUH1 139 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 WASF1Q92558 559 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 WNK4Q96J92 1243 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 UBA5Q9GZZ9 404 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 FEM1BQ9UK73 627 aa14.95□□□□□ -0.02
SPG7-209ENST00000564047 ISY1Q9ULR0 285 aaKnown RBP14.95□□□□□ -0.02
SPG7-209ENST00000564047 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
SPG7-209ENST00000564047 DTNBO60941 627 aa14.94□□□□□ -0.02
SPG7-209ENST00000564047 ZBTB48P10074 688 aaPredicted RBP14.94□□□□□ -0.02
SPG7-209ENST00000564047 DDIT3P35638 169 aa14.94□□□□□ -0.02
SPG7-209ENST00000564047 SLC16A2P36021 539 aa14.94□□□□□ -0.02
SPG7-209ENST00000564047 GJA5P36382 358 aa14.94□□□□□ -0.02
SPG7-209ENST00000564047 SNAPC2Q13487 334 aa14.94□□□□□ -0.02
SPG7-209ENST00000564047 ADGRF4Q8IZF3 695 aa14.94□□□□□ -0.02
SPG7-209ENST00000564047 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
SPG7-209ENST00000564047 CPVLQ9H3G5 476 aa14.94□□□□□ -0.02
SPG7-209ENST00000564047 V9GY48 417 aaPredicted RBP14.94□□□□□ -0.02
SPG7-209ENST00000564047 PPFIA3O75145 1194 aa14.93□□□□□ -0.02
SPG7-209ENST00000564047 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
SPG7-209ENST00000564047 PDCP20941 246 aa14.93□□□□□ -0.02
SPG7-209ENST00000564047 IKQ13123 557 aaPredicted RBP14.93□□□□□ -0.02
SPG7-209ENST00000564047 SYDE2Q5VT97 1194 aa14.93□□□□□ -0.02
SPG7-209ENST00000564047 SPRYD7Q5W111 196 aa14.93□□□□□ -0.02
SPG7-209ENST00000564047 FASTKD5Q7L8L6 764 aaKnown RBP14.93□□□□□ -0.02
SPG7-209ENST00000564047 RGS22Q8NE09 1264 aa14.93□□□□□ -0.02
SPG7-209ENST00000564047 MTMR8Q96EF0 704 aa14.93□□□□□ -0.02
SPG7-209ENST00000564047 RRP36Q96EU6 259 aaKnown RBP14.93□□□□□ -0.02
SPG7-209ENST00000564047 RPAP3Q9H6T3 665 aaPredicted RBP14.93□□□□□ -0.02
SPG7-209ENST00000564047 JMJD4Q9H9V9 463 aa14.93□□□□□ -0.02
SPG7-209ENST00000564047 USP17L15C9J2P7 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 USP17L13C9JLJ4 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 USP17L11C9JVI0 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 USP17L18D6R9N7 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 USP17L22D6RA61 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 USP17L17D6RBQ6 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 USP17L19D6RCP7 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 USP17L20D6RJB6 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 GTF2A2P52657 109 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 USP17L24Q0WX57 530 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 NFKBIBQ15653 356 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 PKN1Q16512 942 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 PFKFB3Q16875 520 aaPredicted RBP14.92□□□□□ -0.02
SPG7-209ENST00000564047 ALG1Q9BT22 464 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 VAT1LQ9HCJ6 419 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 PRR12Q9ULL5 1215 aa14.92□□□□□ -0.02
SPG7-209ENST00000564047 CIZ1Q9ULV3 898 aaPredicted RBP14.92□□□□□ -0.02
SPG7-209ENST00000564047 PNMA6FA0A0J9YX94 578 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 SCG2P13521 617 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 MOGSQ13724 837 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 HABP4Q5JVS0 413 aaKnown RBP14.91□□□□□ -0.02
SPG7-209ENST00000564047 LARP1BQ659C4 914 aaKnown RBP14.91□□□□□ -0.02
SPG7-209ENST00000564047 GADL1Q6ZQY3 521 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms