RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 ORC4O43929 436 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 SLC25A27O95847 323 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 PGK2P07205 417 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 HAND2P61296 217 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 MFSD14CQ5VZR4 134 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 SLFN13Q68D06 897 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 NECAB2Q7Z6G3 386 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 ABRAQ8N0Z2 381 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 PCDH10Q9P2E7 1040 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 SYNPO2Q9UMS6 1093 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 COLQQ9Y215 455 aaPredicted RBP16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 TSPY2A6NKD2 308 aa16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 FCER1AP12319 257 aa16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 GSPT1P15170 499 aaKnown RBP16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 CAPN2P17655 700 aa16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 NOVP48745 357 aa16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 PRPF38AQ8NAV1 312 aaKnown RBP16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 KIFC2Q96AC6 838 aa16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 MAML3Q96JK9 1138 aa16.61■□□□□ 0.25
TNFAIP2-207ENST00000560562 RANBP6O60518 1105 aaKnown RBP16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 COL6A1P12109 1028 aa16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 BMP3P12645 472 aa16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 PRAMEF19Q5SWL8 479 aa16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 SNRNP48Q6IEG0 339 aaKnown RBP16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 CWC27Q6UX04 472 aaKnown RBP16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 MMP19Q99542 508 aa16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 TEX13BQ9BXU2 312 aa16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 SLC38A10Q9HBR0 1119 aa16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 DDX20Q9UHI6 824 aaKnown RBP16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 STX8Q9UNK0 236 aa16.6■□□□□ 0.25
TNFAIP2-207ENST00000560562 ATP2A1O14983 1001 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 MCCP23508 829 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 ZNF792Q3KQV3 632 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 ANO1Q5XXA6 986 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 GMCL1Q96IK5 515 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 C11orf49Q9H6J7 331 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 RAVER2Q9HCJ3 691 aaKnown RBP16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 FEM1BQ9UK73 627 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 LRRC37A2A6NM11 1700 aa16.59■□□□□ 0.25
TNFAIP2-207ENST00000560562 NEDD4P46934 1319 aa16.58■□□□□ 0.25
TNFAIP2-207ENST00000560562 TMEM232C9JQI7 657 aa16.58■□□□□ 0.24
TNFAIP2-207ENST00000560562 CNGA1P29973 690 aa16.58■□□□□ 0.24
TNFAIP2-207ENST00000560562 RRP12Q5JTH9 1297 aaKnown RBP16.58■□□□□ 0.24
TNFAIP2-207ENST00000560562 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
TNFAIP2-207ENST00000560562 KCTD1Q719H9 257 aa16.58■□□□□ 0.24
TNFAIP2-207ENST00000560562 PRO3102Q9H379 93 aa16.58■□□□□ 0.24
TNFAIP2-207ENST00000560562 MYH6P13533 1939 aa16.58■□□□□ 0.24
TNFAIP2-207ENST00000560562 ZNF536O15090 1300 aa16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 EVI5O60447 810 aa16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 TAL1P17542 331 aaPredicted RBP16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 KCTD2Q14681 263 aa16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 FGD4Q96M96 766 aa16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 TOMM22Q9NS69 142 aa16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 DIAPH3Q9NSV4 1193 aa16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
TNFAIP2-207ENST00000560562 DNAJC25-GNG10A0A024R161 153 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 SLC1A4P43007 532 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 STAT2P52630 851 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 SNAP25P60880 206 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 RCSD1Q6JBY9 416 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 C7orf61Q8IZ16 206 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 STAG1Q8WVM7 1258 aa16.56■□□□□ 0.24
TNFAIP2-207ENST00000560562 ZBED4O75132 1171 aa16.55■□□□□ 0.24
TNFAIP2-207ENST00000560562 COPB2P35606 906 aa16.55■□□□□ 0.24
TNFAIP2-207ENST00000560562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.55■□□□□ 0.24
TNFAIP2-207ENST00000560562 TMEM47Q9BQJ4 181 aa16.55■□□□□ 0.24
TNFAIP2-207ENST00000560562 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
TNFAIP2-207ENST00000560562 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
TNFAIP2-207ENST00000560562 LTBP2Q14767 1821 aa16.55■□□□□ 0.24
TNFAIP2-207ENST00000560562 SEPT4O43236 478 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 LRRC26Q2I0M4 334 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 LENG1Q96BZ8 264 aaPredicted RBP16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 AGBL1Q96MI9 1066 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 TINF2Q9BSI4 451 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 HOMER2Q9NSB8 354 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 SLC5A4Q9NY91 659 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 DIS3Q9Y2L1 958 aaKnown RBP16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 NR2E3Q9Y5X4 410 aa16.54■□□□□ 0.24
TNFAIP2-207ENST00000560562 MSCO60682 206 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 PLA2G6O60733 806 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 FXR1P51114 621 aaKnown RBP eCLIP16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 OAZ1P54368 228 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 MFAP1P55081 439 aaKnown RBP16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 GJC2Q5T442 439 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 FAM160B2Q86V87 743 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 PRR12Q9ULL5 1215 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 ZMYND8Q9ULU4 1186 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 TOP1P11387 765 aaKnown RBP16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 SLC16A2P36021 539 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms