RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 USP17L15C9J2P7 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 USP17L13C9JLJ4 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 USP17L11C9JVI0 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 USP17L18D6R9N7 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 USP17L22D6RA61 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 USP17L17D6RBQ6 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 USP17L19D6RCP7 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 USP17L20D6RJB6 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 DTNBO60941 627 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 SLC10A3P09131 477 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 CETPP11597 493 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 GJB2P29033 226 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 HOXA7P31268 230 aaPredicted RBP15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 SLC16A2P36021 539 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 USP17L24Q0WX57 530 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 SYDE2Q5VT97 1194 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 GADL1Q6ZQY3 521 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 CATSPERGQ6ZRH7 1159 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 ADGRF4Q8IZF3 695 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 SPRYD3Q8NCJ5 442 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 JMJD4Q9H9V9 463 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 ORC3Q9UBD5 711 aaPredicted RBP15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
HMBOX1-213ENST00000560269 FAM155AB1AL88 458 aaPredicted RBP15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 PPFIA3O75145 1194 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 DEXIO95424 95 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 PKN1Q16512 942 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 TREML2Q5T2D2 321 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 GPAT2Q6NUI2 795 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 CCDC102AQ96A19 550 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 DDX11Q96FC9 970 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 SLF1Q9BQI6 1058 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 TANGO6Q9C0B7 1094 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 PRR12Q9ULL5 1215 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 AGTPBP1Q9UPW5 1226 aa15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 V9GY48 417 aaPredicted RBP15.81■□□□□ 0.12
HMBOX1-213ENST00000560269 BAZ2BQ9UIF8 2168 aaKnown RBP15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 MYPNQ86TC9 1320 aa15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 TESPA1A2RU30 521 aaPredicted RBP15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 IKQ13123 557 aaPredicted RBP15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 PRPF38AQ8NAV1 312 aaKnown RBP15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 WASF1Q92558 559 aa15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 RRP36Q96EU6 259 aaKnown RBP15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 VAT1LQ9HCJ6 419 aa15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 FBXO28Q9NVF7 368 aa15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 PPP1R9AQ9ULJ8 1098 aa15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 KIF3AQ9Y496 699 aa15.8■□□□□ 0.12
HMBOX1-213ENST00000560269 CCL15-CCL14A0A0B4J2E2 113 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 RASSF10A6NK89 507 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 ZBTB5O15062 677 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 FLOT1O75955 427 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 FDX1P10109 184 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 DSG3P32926 999 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 DDIT3P35638 169 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 MKRN3Q13064 507 aaKnown RBP15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 CCL15Q16663 113 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 PFKFB3Q16875 520 aaPredicted RBP15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 FAM184AQ8NB25 1140 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 BRI3BPQ8WY22 251 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 KIFC2Q96AC6 838 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 PIGSQ96S52 555 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 RANBP17Q9H2T7 1088 aaKnown RBP15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 ADAMTS5Q9UNA0 930 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 SLC45A1Q9Y2W3 748 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 A0A0G2JMZ2 1700 aa15.79■□□□□ 0.12
HMBOX1-213ENST00000560269 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 hCG_1642624A0A1W2PR95 340 aa15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 MANSC4A6NHS7 340 aaPredicted RBP15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 SCG2P13521 617 aa15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 COG2Q14746 738 aa15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 CDC37Q16543 378 aaPredicted RBP15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 ANKRD23Q86SG2 305 aa15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 RGS22Q8NE09 1264 aa15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 ALG1Q9BT22 464 aa15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 HOXC10Q9NYD6 342 aa15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 SEC63Q9UGP8 760 aaKnown RBP15.78■□□□□ 0.12
HMBOX1-213ENST00000560269 BTBD19C9JJ37 291 aa15.77■□□□□ 0.12
HMBOX1-213ENST00000560269 PDCP20941 246 aa15.77■□□□□ 0.12
HMBOX1-213ENST00000560269 QRICH1Q2TAL8 776 aa15.77■□□□□ 0.12
HMBOX1-213ENST00000560269 DEFB115Q30KQ5 88 aa15.77■□□□□ 0.12
HMBOX1-213ENST00000560269 LBX2Q6XYB7 198 aa15.77■□□□□ 0.12
HMBOX1-213ENST00000560269 HOMER1Q86YM7 354 aa15.77■□□□□ 0.12
HMBOX1-213ENST00000560269 PIBF1Q8WXW3 757 aa15.77■□□□□ 0.12
HMBOX1-213ENST00000560269 AIFM3Q96NN9 605 aa15.77■□□□□ 0.12
HMBOX1-213ENST00000560269 COL11A1P12107 1806 aaPredicted RBP15.77■□□□□ 0.11
HMBOX1-213ENST00000560269 SPDYE16A6NNV3 312 aaPredicted RBP15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 hCG_1984214I3L0E3 225 aa15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 VWA5AO00534 786 aa15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 PPP1R11O60927 126 aaPredicted RBP15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 OSBPP22059 807 aa15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 INHBEP58166 350 aa15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 LARP1BQ659C4 914 aaKnown RBP15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 WWC2Q6AWC2 1192 aa15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 FAM177A1Q8N128 213 aaPredicted RBP15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 ZNF713Q8N859 430 aaPredicted RBP15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 ATG4CQ96DT6 458 aa15.76■□□□□ 0.11
HMBOX1-213ENST00000560269 PTPN18Q99952 460 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms