RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SUCLG2Q96I99 432 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 RUNDC3BQ96NL0 473 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 GUCA1BQ9UMX6 200 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 USP19O94966 1318 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 KDM2BQ8NHM5 1336 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 MSL1Q68DK7 614 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 SLC10A4Q96EP9 437 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 RPGRIP1Q96KN7 1286 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 PI4KBQ9UBF8 816 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 CIAPIN1Q6FI81 312 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 IFT20Q8IY31 132 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 PNMA1Q8ND90 353 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 CARD14Q9BXL6 1004 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.22□□□□□ -0.934e-7■■□□□ 13.5
CHD8-213ENST00000557364 ARAP3Q8WWN8 1544 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 DDX39AO00148 427 aaKnown RBP9.22□□□□□ -0.93
CHD8-213ENST00000557364 PDE8BO95263 885 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 XKR9Q5GH70 373 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 PROCA1Q8NCQ7 364 aaPredicted RBP9.22□□□□□ -0.93
CHD8-213ENST00000557364 USP26Q9BXU7 913 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 COA1Q9GZY4 146 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 STAT1P42224 750 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
CHD8-213ENST00000557364 FAM178BQ8IXR5 827 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 DNAJC25Q9H1X3 360 aa9.22□□□□□ -0.93
CHD8-213ENST00000557364 POLR2DO15514 142 aaKnown RBP9.21□□□□□ -0.93
CHD8-213ENST00000557364 SRGAP2BP0DMP2 458 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 EVCP57679 992 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 FAM102BQ5T8I3 360 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 SFMBT2Q5VUG0 894 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 KIAA1841Q6NSI8 718 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 EFCAB13Q8IY85 973 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 DNAI1Q9UI46 699 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 MYL1P05976 194 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 PHBP35232 272 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 MTMR3Q13615 1198 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 IGSF22Q8N9C0 903 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 RAB17Q9H0T7 212 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 LGR6Q9HBX8 967 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 DDX25Q9UHL0 483 aaKnown RBP9.21□□□□□ -0.93
CHD8-213ENST00000557364 GOLGA8QA0A0J9YX86 632 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 GOLGA8OA6NCC3 632 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 GOLGA8NF8WBI6 632 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 STAM2O75886 525 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 FDX1P10109 184 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 ZAP70P43403 619 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 CHRNDQ07001 517 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.93
CHD8-213ENST00000557364 ARHGAP24Q8N264 748 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 TSPYL6Q8N831 410 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 NUB1Q9Y5A7 615 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 ADCY10Q96PN6 1610 aa9.21□□□□□ -0.93
CHD8-213ENST00000557364 ERVK-7P63135 1459 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 TCP10L2B9ZVM9 353 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 CIB2O75838 187 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 LMNB1P20700 586 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 XPAP23025 273 aaPredicted RBP9.21□□□□□ -0.94
CHD8-213ENST00000557364 STAT2P52630 851 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 PRPSAP1Q14558 356 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 SH2D4BQ5SQS7 431 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 FOXP4Q8IVH2 680 aaPredicted RBP9.21□□□□□ -0.94
CHD8-213ENST00000557364 MAP7D3Q8IWC1 876 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 MYOCDQ8IZQ8 938 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 CCDC68Q9H2F9 335 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 CTTNBP2NLQ9P2B4 639 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 USP17L12C9JPN9 530 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 KLRF2D3W0D1 207 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 USP17L21D6R901 530 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 I3L4J1 428 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 KRT81Q14533 505 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 RUFY4Q6ZNE9 571 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 IFNL3Q8IZI9 196 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 COA7Q96BR5 231 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 ANKRD36BP1Q96IX9 119 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 ZNF594Q96JF6 807 aaPredicted RBP9.21□□□□□ -0.94
CHD8-213ENST00000557364 TNNQ9UQP3 1299 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 PCDHA1Q9Y5I3 950 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 BZW2Q9Y6E2 419 aaKnown RBP9.21□□□□□ -0.94
CHD8-213ENST00000557364 ARHGAP31Q2M1Z3 1444 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 ASNSP08243 561 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 USPL1Q5W0Q7 1092 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 RINT1Q6NUQ1 792 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 PLA2G4DQ86XP0 818 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 PPP2R3CQ969Q6 453 aa9.21□□□□□ -0.94
CHD8-213ENST00000557364 INO80BQ9C086 356 aaPredicted RBP9.21□□□□□ -0.94
CHD8-213ENST00000557364 MTIF3Q9H2K0 278 aaKnown RBP9.21□□□□□ -0.94
CHD8-213ENST00000557364 ZMYM6O95789 1325 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 PDE6AP16499 860 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 LONP1P36776 959 aaKnown RBP9.2□□□□□ -0.94
CHD8-213ENST00000557364 OR52Z1P0C646 297 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 GBP6Q6ZN66 633 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 SERPINB13Q9UIV8 391 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 TACC3Q9Y6A5 838 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 SCG2P13521 617 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 RNASELQ05823 741 aaKnown RBP9.2□□□□□ -0.94
CHD8-213ENST00000557364 SEPT2Q15019 361 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 CCDC25Q86WR0 208 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.2□□□□□ -0.947e-24■■■■■ 47.1
CHD8-213ENST00000557364 CROCC2H7BZ55 1655 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 RXRAP19793 462 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms