RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 NRBP1Q9UHY1 535 aa16.84■□□□□ 0.29
SNX6-210ENST00000557341 CTDP1Q9Y5B0 961 aaPredicted RBP16.84■□□□□ 0.29
SNX6-210ENST00000557341 ATP2A1O14983 1001 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 FOXP2O15409 715 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 TFAP4Q01664 338 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 ZNF792Q3KQV3 632 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 GJC2Q5T442 439 aaPredicted RBP16.83■□□□□ 0.28
SNX6-210ENST00000557341 KIFC2Q96AC6 838 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 TINF2Q9BSI4 451 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 FEM1BQ9UK73 627 aa16.83■□□□□ 0.28
SNX6-210ENST00000557341 MYH6P13533 1939 aa16.82■□□□□ 0.28
SNX6-210ENST00000557341 TSPY2A6NKD2 308 aa16.82■□□□□ 0.28
SNX6-210ENST00000557341 ZBED4O75132 1171 aa16.82■□□□□ 0.28
SNX6-210ENST00000557341 PRAMEF19Q5SWL8 479 aa16.82■□□□□ 0.28
SNX6-210ENST00000557341 CPXCR1Q8N123 301 aa16.82■□□□□ 0.28
SNX6-210ENST00000557341 SLC38A10Q9HBR0 1119 aa16.82■□□□□ 0.28
SNX6-210ENST00000557341 HELLSQ9NRZ9 838 aa16.82■□□□□ 0.28
SNX6-210ENST00000557341 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNX6-210ENST00000557341 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
SNX6-210ENST00000557341 BMP3P12645 472 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 STAT2P52630 851 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 ATN1P54259 1190 aaPredicted RBP16.81■□□□□ 0.28
SNX6-210ENST00000557341 OAZ1P54368 228 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 VPS53Q5VIR6 699 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 SLFN13Q68D06 897 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 TDHQ8IZJ6 230 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 DDX11Q96FC9 970 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 LNPKQ9C0E8 428 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 ISY1Q9ULR0 285 aaKnown RBP16.81■□□□□ 0.28
SNX6-210ENST00000557341 STX8Q9UNK0 236 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 RIPK3Q9Y572 518 aa16.81■□□□□ 0.28
SNX6-210ENST00000557341 FDX1P10109 184 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 RARBP10826 455 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 SLC4A3P48751 1232 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 CTDSPL2Q05D32 466 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 TICAM2Q86XR7 235 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 MSL3Q8N5Y2 521 aaKnown RBP16.8■□□□□ 0.28
SNX6-210ENST00000557341 GMCL1Q96IK5 515 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 UBE2OQ9C0C9 1292 aaKnown RBP16.8■□□□□ 0.28
SNX6-210ENST00000557341 XPNPEP3Q9NQH7 507 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 FBXO40Q9UH90 709 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 ANAPC4Q9UJX5 808 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 CNPY2Q9Y2B0 182 aa16.8■□□□□ 0.28
SNX6-210ENST00000557341 COL6A3P12111 3177 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 ZMYM6O95789 1325 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 SYNGAP1Q96PV0 1343 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 DNAJC25-GNG10A0A024R161 153 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 A0A0D9SFI3 127 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 SOX1O00570 391 aaPredicted RBP16.79■□□□□ 0.28
SNX6-210ENST00000557341 AKR1A1P14550 325 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 RTP1P59025 263 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 LRRC41Q15345 812 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 MCMDC2Q4G0Z9 681 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNX6-210ENST00000557341 FAM160B2Q86V87 743 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 FAM227BQ96M60 508 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 RAVER2Q9HCJ3 691 aaKnown RBP16.79■□□□□ 0.28
SNX6-210ENST00000557341 PRKAG2Q9UGJ0 569 aa16.79■□□□□ 0.28
SNX6-210ENST00000557341 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 TMEM232C9JQI7 657 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 RANBP6O60518 1105 aaKnown RBP16.78■□□□□ 0.28
SNX6-210ENST00000557341 SLC1A4P43007 532 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 MDM2Q00987 491 aaPredicted RBP16.78■□□□□ 0.28
SNX6-210ENST00000557341 IKQ13123 557 aaPredicted RBP16.78■□□□□ 0.28
SNX6-210ENST00000557341 ALX1Q15699 326 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 ZNF467Q7Z7K2 595 aaPredicted RBP16.78■□□□□ 0.28
SNX6-210ENST00000557341 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 ANKRD35Q8N283 1001 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 CHST13Q8NET6 341 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 CHURC1Q8WUH1 139 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 RWDD1Q9H446 243 aaPredicted RBP16.78■□□□□ 0.28
SNX6-210ENST00000557341 ATP11BQ9Y2G3 1177 aa16.78■□□□□ 0.28
SNX6-210ENST00000557341 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
SNX6-210ENST00000557341 ORC4O43929 436 aa16.77■□□□□ 0.28
SNX6-210ENST00000557341 ZNF865P0CJ78 1059 aaPredicted RBP16.77■□□□□ 0.28
SNX6-210ENST00000557341 TAL1P17542 331 aaPredicted RBP16.77■□□□□ 0.28
SNX6-210ENST00000557341 SNX17Q15036 470 aa16.77■□□□□ 0.28
SNX6-210ENST00000557341 LRIT3Q3SXY7 679 aa16.77■□□□□ 0.28
SNX6-210ENST00000557341 MAMDC4Q6UXC1 1216 aa16.77■□□□□ 0.28
SNX6-210ENST00000557341 SLC39A5Q6ZMH5 540 aa16.77■□□□□ 0.28
SNX6-210ENST00000557341 RNF180Q86T96 592 aa16.77■□□□□ 0.28
SNX6-210ENST00000557341 LBHD1Q9BQE6 289 aaPredicted RBP16.77■□□□□ 0.28
SNX6-210ENST00000557341 IL17RBQ9NRM6 502 aa16.77■□□□□ 0.28
SNX6-210ENST00000557341 NMT2O60551 498 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 PLA2G6O60733 806 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 MCCP23508 829 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 ADCYAP1R1P41586 468 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
SNX6-210ENST00000557341 TRIM60Q495X7 471 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 STAG1Q8WVM7 1258 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 RILPL2Q969X0 211 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 ACAD9Q9H845 621 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 TOMM22Q9NS69 142 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 HOMER2Q9NSB8 354 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 ZHX1Q9UKY1 873 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms